Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0860 ATGTTGCAACCTCTAGTGTTTATCTGCTACTCTCTATTCCAAAGGGATCAACAATATGAATATGTTTCATCTGAGTATGATTACGAAGAAGAAGAAGAAGAAGAAGTTCGAGGGAGTTATTTTTACGAAGATTCTATTGAGAAAGATCATTTAGTAGCTGATGTAATTTGTGGTGGAGAAGCTCTTATGTTTTTGCATAGTAATAACAAATCTCAAAGGAATCACAATTTTTCTTTTGAAGAAGAACAAGAAGAAGAAGAGTTTATAACACCACAAGAAAGCTTGGTTGAAGAGTTTCCAGAAGAAGAAAAAAATTCATCAGAAAATTTGCATGTTCATCACAAGTCACCAATTGTTTCAGATTTTGAGACAGAAATTAATGAAACAGAATTTCAAGAAGAAGAAGATGCTGATTCTGTTCCAGATTCTGTTCCAGATTCTATTCCAATCGAAAGCAGGACCACTTCTCATATCACAACGAATCTATACAAAAGTGATGACTTAGTAGGATGTGACAAAAACAAGAAAGTGGATGAATCAAATGTTGAAAGAGATGAGAGATTATTTGTGATTGGTGCAACACATTTGGAGAGAAATAAGAAGTTGATATTTGAAGAAAAAGATGATGAAGAGATATATGGTGATTCATGCACTGTTGGTTCAACTTCTAAAAGCTCTTCTGATTGGAGAAGCTCAATTATTTGTAGAGATTCTGGAACTGATGACCCTTTTTCTTCTTCATCAAGAGGAAGTTGTCCTAAGTGGGAATCTTACACTGTTTTTCAAAAATATGATGAAGAAATGTCGTTCCTAGAGAGAATTAGTGCACAAAAACTTCATGAAACAGAGTCTTTAAGATCTATCAAAGTAGCTCCAAGGTCAATTTCAGAGAGAATTGTGTACAAATTTTCAAGTATGAGTAAAAAGCCAGAAGATATAAGTAATCACAATCCATACTGTGAACTGGAAAGTGCTTATGTTGCACAAATTTGCTTAACATGGGAAGCACTTAATTGGAACTACAAGAATTTTCAATCAAAAAGAGCTTCAAATGTTGATGTTGGTTGTCCAGCAACAATTGCACAACAATTTCAACAGTTTCAAGTTTTGTTACAAAGATATGTTGAGAATGAACCTTATGAATATGGTAGAAGACCTGAGATTTATGCTAGAATGAGACATTTGGCTCCAAAATTGCTTCTAGTCCCTGAATATCGAGATTCAGATGATGATCAGAAGGAGAAGGTTGGGTTTAACTCAAAAATTTCATCAGCTTCATTTCTTGTGATAATGGAAGATGGAATCAGAACATTCATGAGTTTTCTAAAGGCTGATAAAGAGAAAACATGTCAGATCATTGCATCTTACTTTCGAAGAAATCGAAAAACCTTGATTGATCCAACACTAATTCGTCTTATGAAGAAAGTTAATCAAAAGGCAAGCTCCTAA 1449 0.3389 MLQPLVFICYSLFQRDQQYEYVSSEYDYEEEEEEEVRGSYFYEDSIEKDHLVADVICGGEALMFLHSNNKSQRNHNFSFEEEQEEEEFITPQESLVEEFPEEEKNSSENLHVHHKSPIVSDFETEINETEFQEEEDADSVPDSVPDSIPIESRTTSHITTNLYKSDDLVGCDKNKKVDESNVERDERLFVIGATHLERNKKLIFEEKDDEEIYGDSCTVGSTSKSSSDWRSSIICRDSGTDDPFSSSSRGSCPKWESYTVFQKYDEEMSFLERISAQKLHETESLRSIKVAPRSISERIVYKFSSMSKKPEDISNHNPYCELESAYVAQICLTWEALNWNYKNFQSKRASNVDVGCPATIAQQFQQFQVLLQRYVENEPYEYGRRPEIYARMRHLAPKLLLVPEYRDSDDDQKEKVGFNSKISSASFLVIMEDGIRTFMSFLKADKEKTCQIIASYFRRNRKTLIDPTLIRLMKKVNQKASS* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0860 482 PANTHER DNA LIGASE (DUF1666)-RELATED 7 479 - -
Psa1g0860 482 PANTHER DUF1666 FAMILY PROTEIN 7 479 - -
Psa1g0860 482 Pfam Protein of unknown function (DUF1666) 321 479 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0860 Psa-Chr1 57781807 57786258 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0860 - - gmx:100786564 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0860 1 57781807 57786258 Psa1g0860 1 57781807 57786258 ECH