Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0856 ATGCGTGTTAGAGTGAGGGTTAGTGTTCCAAAAGCTGGACTTACACAAGAGGTTATGGAGAAGATTCATGAGAGATGGAGGAAAGAGGAGTTGGTTAGACTTAAGTTTCATGAGGAACTTGCTAAGAATATGAGGATTGCTCATCAGATTGTTGAGCGGCGAACAGGAGGATTGGTTACATGGAAAGCAGGAAGTATTATGATGGTGTATCGTGGTAAAAATTACCAAGGTCCTGCCTCCCTGGAGGAACTCGATGTGAGAGAAGGGGATGGCTTTTTTGTGCCGGATGTCTCATCAGGAGGTTTGTCGAAAACAATAGACAGTAACGCAACCTCATCACTCGAAAACAGTGAGTCGGTTAGGAGGATCAGTGAACCGCCTGAGAACATGACAAAAGAAGAAGCAGAGTACAATGCACTGCTTGATGGTTTAGGTCCTCGATTCGTTGAATGGTGGGGTACAGGAATACCTCCGGTTGATGCTGACTTACTTCCGCGTGTCGTTCCTGGTTATAAAACACCTTATAGGCTTCTACCTATCGGAATGCGGTCTCGGCTAACAAGTGCAGAAATGACCGATTTGAGGAAAACTGCAAAGTCACTTCCTAGTCATTTTGCCTTAGGGAGAAATCGAAATCACCAAGGCCTAGCATGTGCTATTCTTAAGCTTTGGGAGAAGAGTTTGATCGCAAAGATTGCCGTTAAACCTGGTATCCAGAACACAAACAATAAACTAATGGCCGACGAACTTAGTACATTAACAGGAGGTACCTTGCTGCTAAGGAATAAGTTTTACATTGTTATATATCGTGGGAAGGACTTCGTTCCAACAGACGTGGCTACAGTTTTGGCTGAAAGACAGGAATTGACGAAACAGGTACATGATGTTGAAGAGAAAGTGCGGTGCAGAGCCGTTGTTGCAACTCCATCTGGACAAGGTGAAACAACGGCACCGGCGGGATCTTTAGCAGAGTTCTATGAGGCTCAGGCTCGTTGGGGAAGGGACGTATCTAGTGAAGAGCGTGAGAGGATGATAGAAGAAGCTACCAAAGCTAAGAATGTTAAGCTTGTTAAACAAATCGAGCGCAAACTCTCTCTTGCCGGGACCAAAATGCATAGAGCCGAAAAGCTGTTAGCCAAAATAGAATCATCCATGGTTTCAGCTGGTCCTGATTACGACCAGGAAATAATCACAGACGAAGAACGTGTCGTGTTCCGCCGGATTGGTTTAAGAATGAAGCCATACTTACCACTTGGTATACGCGGTGTTTTTGATGGTGTCATTGAGAACATGCATTTGCATTGGAAACATCGAGAGCTTGTAAAATTGATAACAAAGCAAAAAACTCTTGCTTTCGTTGAAGACACGGCAAGGTTACTTGAATACGAAAGTGGTGGAATACTCGTGGCAATAGAGAAAACTTCTAAAGGATTTGCTCTTATTTACTATCGCGGTAAAAACTATAAGCGGCCCATTACTTTAAGGCCTAGAAACCTTCTAACAAAGGCAAAGGCATTGAAGCGTTCTGTAGCCATGCAACGCCACGAGAATTTGAGCAACCATATTACAGCATTGGAAACGACAATTGAACAAATGAAACAAGAACTTGGTCTATCTGAAGATGATTGGAGCGTGAAGGAAGGACATGAAAGCCAATTAGATCAAATCTCAGAATTTACTCAAAGTGAAGATGATGAAGATTCTGACGGTTCTGAGGATGATGAGGAAGACGCCGATTGGGATGAAGACGAGGACTCCGAGTTTTCAGAACTCGACGTCGACGAGCATCCTTGA 1794 0.4387 MRVRVRVSVPKAGLTQEVMEKIHERWRKEELVRLKFHEELAKNMRIAHQIVERRTGGLVTWKAGSIMMVYRGKNYQGPASLEELDVREGDGFFVPDVSSGGLSKTIDSNATSSLENSESVRRISEPPENMTKEEAEYNALLDGLGPRFVEWWGTGIPPVDADLLPRVVPGYKTPYRLLPIGMRSRLTSAEMTDLRKTAKSLPSHFALGRNRNHQGLACAILKLWEKSLIAKIAVKPGIQNTNNKLMADELSTLTGGTLLLRNKFYIVIYRGKDFVPTDVATVLAERQELTKQVHDVEEKVRCRAVVATPSGQGETTAPAGSLAEFYEAQARWGRDVSSEERERMIEEATKAKNVKLVKQIERKLSLAGTKMHRAEKLLAKIESSMVSAGPDYDQEIITDEERVVFRRIGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIEKTSKGFALIYYRGKNYKRPITLRPRNLLTKAKALKRSVAMQRHENLSNHITALETTIEQMKQELGLSEDDWSVKEGHESQLDQISEFTQSEDDEDSDGSEDDEEDADWDEDEDSEFSELDVDEHP* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0856 597 MobiDBLite consensus disorder prediction 559 590 - -
Psa1g0856 597 Coils Coil 515 542 - -
Psa1g0856 597 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 1 594 - -
Psa1g0856 597 MobiDBLite consensus disorder prediction 108 129 - -
Psa1g0856 597 Coils Coil 279 299 - -
Psa1g0856 597 SUPERFAMILY YhbY-like 396 494 IPR035920 -
Psa1g0856 597 ProSiteProfiles CRM domain profile. 184 281 IPR001890 GO:0003723
Psa1g0856 597 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 1 594 IPR045278 GO:0000375|GO:0003729
Psa1g0856 597 SUPERFAMILY YhbY-like 3 79 IPR035920 -
Psa1g0856 597 MobiDBLite consensus disorder prediction 544 597 - -
Psa1g0856 597 Pfam CRS1 / YhbY (CRM) domain 398 475 IPR001890 GO:0003723
Psa1g0856 597 Pfam CRS1 / YhbY (CRM) domain 186 270 IPR001890 GO:0003723
Psa1g0856 597 Pfam CRS1 / YhbY (CRM) domain 4 71 IPR001890 GO:0003723
Psa1g0856 597 Gene3D - 1 83 IPR035920 -
Psa1g0856 597 Gene3D - 396 498 IPR035920 -
Psa1g0856 597 Gene3D - 185 278 IPR035920 -
Psa1g0856 597 SUPERFAMILY YhbY-like 186 276 IPR035920 -
Psa1g0856 597 ProSiteProfiles CRM domain profile. 1 82 IPR001890 GO:0003723
Psa1g0856 597 ProSiteProfiles CRM domain profile. 395 495 IPR001890 GO:0003723
Psa1g0856 597 SMART CRS1_YhbY_2 1 71 IPR001890 GO:0003723
Psa1g0856 597 SMART CRS1_YhbY_2 186 270 IPR001890 GO:0003723
Psa1g0856 597 SMART CRS1_YhbY_2 397 484 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0856 Psa-Chr1 57558935 57563445 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0856 - - gmx:100788177 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0856 1 57558935 57563445 Psa1g0856 1 57558935 57563445 ECH