Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0810 ATGACTGTGAAAACACCTGGAACACCGGCCTCAAAGATAGATAGGACACCGGCATCAACTCCTGGAGGGCCAAGAGCTCGGGAAGACAAGATTGTGGTTACAGTAAGGTTAAGGCCTTTAAACAGAAGGGAACAATTGGCTAAAGACCAGGTGGCATGGGATTGCATTGATGATTATACTATTGTGTATAAACCACCGCAATATGAACGTGCTACTCAACCGGCATCCTTTACTTTTGATAAAGTTTTTGGTCCTGCTTCTGTTACCGAGGCAGTATATGAAGAAGGAGTAAAGAATGTTGCATTGTCTGCACTGATGGGGATCAATGCTACTGTTTTTGCTTATGGACAAACTAGTAGTGGAAAGACATACACAATGAGAGGAATCACAGAGAAGGCCGTCAATGATATTTATAACCATATAATGAAGAATCCTGAGAGAAATTTCACTATAAAAATATCTGGACTAGAAATATACAATGAAAATGTAAGGGACTTGTTAAATTCAGAACCTGGTCGAAGTTTGAAGCTTTTAGATGATCCTGAGAAAGGTACTGTGGTTGAGAAATTGGTGGAAGAAACAGCAAAGGATGACAAACACTTGAGACATTTGATCTCCATTTGTGAAGCTCAAAGACAGGTGGGCGAAACTGCTCTGAATGATAACAGCTCGAGGTCTCACCAGATAATACGACTGACAATTCAAAGCACTCTTCGTGAAGAAGCAGATTGTGTGAAATCTTTTGTTGCAACCCTGAACTTTGTTGATCTGGCTGGAAGTGAGAGGGCTGCACAGACACATGCAGATGGCACTAGGCTCAAAGAAGGCTGCCATATTAACCTTAGCCTTATGACCCTTACAACTGTTATCAGGAAGCTCAGTGTTGGGAAAAGAAGTGGTCATATACCTTATAGAGATTCAAAGCTCACGCGTATTCTGCAACATTCCCTTGGTGGGAATGCACGCACTGCCATTATATGTACCTTGAGTCCAGCATTAACTCATGTAGAGCAATCACGAAATACCCTCTACTTTGCTACTCGGGCTAAAGAAGTTACAAATAATGCTCAAGTAAACATGGTGGTACCAGAAAAGCAGCTTGTTAAACATTTGCAAAAGGAAGTGGCAAGGCTGGAAGCAGTGCTGCGTACTCCTGATCCATCTAAAGAAAAGGATTGGAAAATTCAACAGATGGAAATGGAAATTGAAGAGCTGAAACGTCAGAGAGATCAAGCACAAACTCAAGTCGATGAGTTACGAAGAAAGCTTCAAGAAGACCAACAGGTCTCAAAGCCACTTGAATCAGCACATTCTTCAGTCAAAAAGTGTCTATCTTTCACTGGTGCATCATTACCTTCACCAAAATCAGGGCTAGGCTGTGAGAGAGTGAGAAACGCGTCATTAAGACAGTCCATGAGGCAATCATCCACTGCTCCTTTTGCCCTTATGCATGAAATTCGCAAACTTGAGCACCTCCAGGAGCAGCTAGGCGAAGAAGCCAACAGAGCTTTGGAAGTATTACAAAAAGAAGTGGCATGTCATAGATTAGGTAACCAAGATGCAGCAGAGACAATTGCGAAGCTGCAATCAGAAATAAGGGAAATGCGTTCTGTTAGGCCAGCACCTAAAGCAGTTGTAGTTGGAAGCATGGTTTCTGTCAACAAAAGTGTCAGTGCTAATCTAAAGGAAGAGATTACCCGTCTTCATTCACAAGGAAGCACCATTGCAAATCTTGAGCAGCAGCTTGAGAATGTGCAAAAGTCTATAGACAAGTTGGTGATGTCTCTCCCTAACAATTTTCAAACTTTAATAACCAATGAAGTATCCCCCAAGCATAAAAAGGAACATAAAAGGAAGAAGTTGCTTCCTTTATGTTCAAGCAACTCTGCTAATCGCCCGAACTTTATTAGATCTCCCTGCTCACCATTATCTACCACTCAACAAGTTTTGGAATCTGATATTGAAAATAAAGCCCCTGAGAATGATGACAACGTTTCAACAGAAATCCATCCCGAGTCCGAGAAGGATACTCCCTCAAAAAGTGAGGAAGCAGGAGACATTACATCAAAGGAAAATACTCCAGGTTACCGTCGCTCTAGTTCAGTTAACATGAAGAAAATGCAGAAAATGTTTCAGAATGCAGCAGAGGAGAATGTAAGAAGTATAAGAGCATACGTGACAGAATTGAAAGAACGTGTGGCCAAGCTGCAGTACCAAAAGCAGTTACTTGTTTGCCAGGTACTTGAGCTTGAGGCAAATGAAGCAAGTGGCCACAACATAGAAGATGAAGTGGACACAGGTGAACCAGAGGAACCTCAAGTTTTGTGGCAAGTAACATTTAAAGAGCAGCGACAACTGATCCTTGAATTATGGGATGCATGTTATGTCTCCATTATTCACAGGACCCAGTTTTATTTGCTATTCAAGGGAGATCCAGCTGATCAAATATATGTAGAAGTTGAACTAAGGCGTTTGACTTGGTTGCAACAACACCTAGCAGAACTCGGGAATGCAAGTCCAGCTCCTAATGTTGGAGGAGATGAACCAACTATCTCACTGTCATCAAGTATGAGAGCATTGAAAAGAGAACGAGAATTTCTCGCCAAGAGATTGATATCACGTTTGACGCCAGAAGAGAGGGAGACATTATATATGAAATGGGATGTCCCCCTTGAAGGGAAGCAGAGGAAGATGCAATTTATCAACAAGCTTTGGACAGATCCTCATGATCAAAGACATGTAGAAGAAAGTGCTGAAATAGTTGCAAAGCTGGTGGGTTTCTGCACAGGAGGTAACATGTCGAAGGAAATGTTCGAGCTGAATTTTGTGCTTCCTTCCGATAAGAGGCCATGGTTAATGGGCTGGAACCATTTGACAAACTTACTTAATTTGTAA 2895 0.4187 MTVKTPGTPASKIDRTPASTPGGPRAREDKIVVTVRLRPLNRREQLAKDQVAWDCIDDYTIVYKPPQYERATQPASFTFDKVFGPASVTEAVYEEGVKNVALSALMGINATVFAYGQTSSGKTYTMRGITEKAVNDIYNHIMKNPERNFTIKISGLEIYNENVRDLLNSEPGRSLKLLDDPEKGTVVEKLVEETAKDDKHLRHLISICEAQRQVGETALNDNSSRSHQIIRLTIQSTLREEADCVKSFVATLNFVDLAGSERAAQTHADGTRLKEGCHINLSLMTLTTVIRKLSVGKRSGHIPYRDSKLTRILQHSLGGNARTAIICTLSPALTHVEQSRNTLYFATRAKEVTNNAQVNMVVPEKQLVKHLQKEVARLEAVLRTPDPSKEKDWKIQQMEMEIEELKRQRDQAQTQVDELRRKLQEDQQVSKPLESAHSSVKKCLSFTGASLPSPKSGLGCERVRNASLRQSMRQSSTAPFALMHEIRKLEHLQEQLGEEANRALEVLQKEVACHRLGNQDAAETIAKLQSEIREMRSVRPAPKAVVVGSMVSVNKSVSANLKEEITRLHSQGSTIANLEQQLENVQKSIDKLVMSLPNNFQTLITNEVSPKHKKEHKRKKLLPLCSSNSANRPNFIRSPCSPLSTTQQVLESDIENKAPENDDNVSTEIHPESEKDTPSKSEEAGDITSKENTPGYRRSSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEASGHNIEDEVDTGEPEEPQVLWQVTFKEQRQLILELWDACYVSIIHRTQFYLLFKGDPADQIYVEVELRRLTWLQQHLAELGNASPAPNVGGDEPTISLSSSMRALKREREFLAKRLISRLTPEERETLYMKWDVPLEGKQRKMQFINKLWTDPHDQRHVEESAEIVAKLVGFCTGGNMSKEMFELNFVLPSDKRPWLMGWNHLTNLLNL* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0810 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 385 IPR027417 -
Psa1g0810 964 ProSitePatterns Kinesin motor domain signature. 250 261 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa1g0810 964 MobiDBLite consensus disorder prediction 1 15 - -
Psa1g0810 964 Coils Coil 388 429 - -
Psa1g0810 964 ProSiteProfiles Kinesin motor domain profile. 30 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0810 964 Gene3D Kinesin motor domain 24 383 IPR036961 -
Psa1g0810 964 PANTHER CENTROMERE PROTEIN E 14 963 - -
Psa1g0810 964 PANTHER KINESIN-LIKE PROTEIN KIN-7A 14 963 - -
Psa1g0810 964 Coils Coil 568 595 - -
Psa1g0810 964 Coils Coil 489 509 - -
Psa1g0810 964 Pfam Kinesin motor domain 36 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0810 964 Coils Coil 518 538 - -
Psa1g0810 964 MobiDBLite consensus disorder prediction 655 687 - -
Psa1g0810 964 PRINTS Kinesin heavy chain signature 107 128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0810 964 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0810 964 PRINTS Kinesin heavy chain signature 251 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0810 964 PRINTS Kinesin heavy chain signature 302 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0810 964 MobiDBLite consensus disorder prediction 1 27 - -
Psa1g0810 964 MobiDBLite consensus disorder prediction 655 701 - -
Psa1g0810 964 Pfam Domain of unknown function (DUF3490) 780 944 IPR021881 -
Psa1g0810 964 CDD KISc_CENP_E 30 352 - -
Psa1g0810 964 SMART kinesin_4 28 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa1g0810 964 MobiDBLite consensus disorder prediction 607 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0810 Psa-Chr1 52139506 52146389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0810 21 435 Miscellaneous Gene Families AT5G06670 38.443 5.43e-80 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0810 K11498 - gmx:100806354 1679.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0810 1 52139506 52146389 Psa1g0810 1 52139506 52146389 ECH