Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0808 ATGGCACACAATACATCATCTGATTCTGATAATGAAATTTCTACTAGAACTAAACTCTTTGAACATGAAAAACCTATCCATGAAATTCTTGGAGGAGGAAAAGTGGCAGATATATTATTATGGAGGAACAGATATGAATCTGCTGCACTTTTTCTTGGGATGACAGTGATATGGTTTCTATTCGAGATCCTTGAGTACAATTTTGTGACAATCATTTGTCAAATTTTCATCACCATGATGCTTGTTCTATTCATTTGCTCCAAATTTGCTGATATATTAAAATGGAAAATACCTGAAATACCAGAAATTATTTTACAAGAGTCTTTCTTCAATGATCTTGCTTTCATCCTCTACAGAAGACTCAACCAGTTATTACCAATACTTTTCCATATTGCATGTGGAAGAAACCTACCACTCTTTCTTATGATCATTGTTTCCCTCTATATAGTCTCAGTGATTGGAAGCTACTTCAGCTTCGTTAATCTTCTATACATCGGCTATCTCTGCATGCAAACATTGCCAACTGTGTTCGAACGGTACGACGAAGAAATTAACATTCTGTTTGAAGATATCATGTTAGTACTCAAGAAAATGTATAGGATGTTTGAAAAGAATTATCTCAGAAAAATTCCTAGAGGACCATTGAAGGACAAAAAAGCTCAATGA 666 0.3423 MAHNTSSDSDNEISTRTKLFEHEKPIHEILGGGKVADILLWRNRYESAALFLGMTVIWFLFEILEYNFVTIICQIFITMMLVLFICSKFADILKWKIPEIPEIILQESFFNDLAFILYRRLNQLLPILFHIACGRNLPLFLMIIVSLYIVSVIGSYFSFVNLLYIGYLCMQTLPTVFERYDEEINILFEDIMLVLKKMYRMFEKNYLRKIPRGPLKDKKAQ* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0808 221 Pfam Reticulon 35 189 IPR003388 -
Psa1g0808 221 ProSiteProfiles Reticulon domain profile. 35 221 IPR003388 -
Psa1g0808 221 PANTHER RETICULON-LIKE PROTEIN B9 5 219 - -
Psa1g0808 221 PANTHER RETICULON 5 219 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0808 Psa-Chr1 52075795 52078624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0808 - - gmx:100809028 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0808 1 52075795 52078624 Psa1g0808 1 52075795 52078624 ECH