Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0753 ATGATAACTCTAATAGATTTCTACCATGTCATGACAGCAATGGTGCCACTTTATGTTGCTATGATCTTAGCTTATGGATCAGTGAAATGGTGGAAGATATTCTCACCTGATCAATGTTCAGGAATCAACCGTTTTGTAGCACTTTTCGCTGTTCCACTTCTCTCATTCCATTTCATAGCCTCAAACAATCCTTACAAAATGAACCTAAGATTCTTAGCTGCAGACACACTTCAAAAAATCATGATCCTAACCCTTCTCTTCATTTGGAGCAATTTCTCCAAAAGGGGTTCTCTAGAATGGACAATAACACTCTTTTCACTCTCAACTTTGCCAAACACTTTGGTCATGGGAATCCCTTTACTCAAAGGAATGTACGGCGATTTCTCAGGTAGTTTAATGGTGCAAATCGTTGTTCTTCAATGTATTATCTGGTATACTATGATGCTTTTCATGTTTGAGTTTAGAGGAGCAAGGTTGTTGATTTCTGAACAGTTTCCCGACACTGCTGGTTCCATTGTTTCCATCCATGTTGATTCTGATGTCATGTCATTAGACGGTAGAACACCATTGGAAACCGATGCTGAAATCAAACAAGATGGTAAACTTCATGTTACTGTTAGAAAATCAAACGCTTCAAGATCAGATATTTACTCAAGAAGATCACAGGGTCTTTCTTCCAACACTCCTAGGCCTTCTAATCTTACTAACGCCGAGATTTACTCGTTGCAATCTTCGCGAAATCCTACGCCAAGAGGGTCTAGTTTTAATCATACTGATTTTTATTCTATGATGGGTGGTGGAAGAAACTCTAACTTTAATGCTTCTGATGTTAATAACTACGGTTTATCGGCCTCGCGAGGTGTTACTCCGAGGCCGTCTAATTACGAAGAAGATGCTTCGAATGCAAAGAAGTTGAAACATTATCCGGCTCCGAATCCGGGAATGTTTTCTCCTACAAATAAAAATCTTGGTTCTAATGTCAATGTTAAGAGAAGTAATGTGGAGGGTCATAGAGAAACTCAAGAGGATTATTTGGAGAAAGATGAATTCAGCTTTGGAAATAGAGGAATGGAAAGGGAAATGAATAATCAACAACATGAAGGTGAAAAAATTGGAGATGGAAAATCAAAAGTTATGCCACCAGCTAGTGTTATGACAAGGCTTATATTGATTATGGTTTGGAGAAAACTTATCAGAAACCCAAACACTTATTCAAGCTTAATCGGTCTAGTTTGGTCTCTAGTTTCATTCAGATGGAATATTGAAATGCCTGCTATAATAGCAAAATCTATATCTATATTGTCGGACGCAGGACTTGGCATGGCCATGTTCAGTCTCGGTTTATTCATGGCATTGCAACCAAAAATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCAATGGCTGTGAGATTCCTTACAGGTCCAGCTGTGATGGCAGCTGCTTCATTTGCTGTTGGACTCAAAGGTGTTCTTTTTCATGTTGCAATTGTGCAGGCAGCTCTTCCCCAAGGAATTGTCCCATTTGTCTTTGCTAAAGAATATAATGTACATCCTGATATTCTAAGCACAGGTGTCATTTTTGGAATGTTGATTGCATTGCCCATTACTCTTGTGTACTACATTTTAATGGGACTATGA 1641 0.387 MITLIDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIMILTLLFIWSNFSKRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTMMLFMFEFRGARLLISEQFPDTAGSIVSIHVDSDVMSLDGRTPLETDAEIKQDGKLHVTVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMGGGRNSNFNASDVNNYGLSASRGVTPRPSNYEEDASNAKKLKHYPAPNPGMFSPTNKNLGSNVNVKRSNVEGHRETQEDYLEKDEFSFGNRGMEREMNNQQHEGEKIGDGKSKVMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIAAFAMAVRFLTGPAVMAAASFAVGLKGVLFHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILMGL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0753 546 Pfam Membrane transport protein 9 541 IPR004776 GO:0016021|GO:0055085
Psa1g0753 546 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 319 546 - -
Psa1g0753 546 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 1 322 - -
Psa1g0753 546 MobiDBLite consensus disorder prediction 212 234 - -
Psa1g0753 546 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 322 - -
Psa1g0753 546 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 319 546 - -
Psa1g0753 546 TIGRFAM 2a69: auxin efflux carrier 1 546 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0753 Psa-Chr1 48540933 48544476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0753 1 537 Organic Solute Cotransporters AT1G73590 68.336 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0753 K13947 - gmx:100499637 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0753 1 48540933 48544476 Psa1g0753 1 48540933 48544476 ECH
Psa7g0070 7 4868376 4872211 Psa1g0753 1 48540933 48544476 PCT