Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0709 ATGGCGGATCACAACCAAAAAGCTGAGATCTTTGAACTCAACAATGGAACCGTGCAGCTTCTCGTTACCAATCTCGGTTGCACAATCACATCCTTCTCCGTACCTGGCAAAGATGGTGTGTTATCCGATGTTGTTCTTGGTCTGGACTCTGTTGAATCCTATCAGAAAGGTCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTTGCAAACCGGATTAAGGATGGAAAGTTTAAACTTGATGGGGTTGAGTACTCTTTGCCTCTCAACAGACCCCCATGCAGTCTTCATGGTGGAAATGTTGGGTTTGATAAGAAGGTATGGGAGGTAATTGAATATAAAAAAGGAGAAACTCCTTCAATCACTTTTAAGTATGAAAGTCATGATGGAGAGGAAGGTTATCCTGGGGACATCACTGTTACCGCAACTTACACCCTCACCTCAAGCACGACTCTGAGGCTCGACATGGAAGGAGTGCCTAAGAACAAGCCCACAATCATTAACTTAGCTCAGCATACCTATTGGAACTTAGCTGGCCATAACTCAGGCCATATACTTGATCATTCAATTAAGATACCGGCTAACCATGTCACTCCTGTTGATCAGAACACAGTACCAACCGGCGAAATCATGCCAGTGAAGGGGACACCTTTTGATTTTACGTCTGAAAGAAGAATAGGCGACACCGTTAATCAGGTTGGTCTAGGATATGACCATAACTACGTCCTCGATTGTGGCGAAGAGAAAGCTGGTTTGAAGCATGCTGCCAAAGTTAGAGATCCATCAAGCTCAAGGGTACTTAACTTGTGGACGAATGCACCCGGTATGCAATTCTACACAGCAAATTACGTCAACAACGTAACTGGAAAAGGAGGCGCTGTATATGGAAAGCATGCTGGATTATGTCTCGAGACACAAGGATTCCCTGATGCGGTAAACCACTCGCATTTCCCGTCTGTTGTGGTTCGACCTGGCGACAAATATCAACATACTATGTTGTTTGAGTTTTCAATCGAATGA 1020 0.4461 MADHNQKAEIFELNNGTVQLLVTNLGCTITSFSVPGKDGVLSDVVLGLDSVESYQKGLAPYFGCIVGRVANRIKDGKFKLDGVEYSLPLNRPPCSLHGGNVGFDKKVWEVIEYKKGETPSITFKYESHDGEEGYPGDITVTATYTLTSSTTLRLDMEGVPKNKPTIINLAQHTYWNLAGHNSGHILDHSIKIPANHVTPVDQNTVPTGEIMPVKGTPFDFTSERRIGDTVNQVGLGYDHNYVLDCGEEKAGLKHAAKVRDPSSSRVLNLWTNAPGMQFYTANYVNNVTGKGGAVYGKHAGLCLETQGFPDAVNHSHFPSVVVRPGDKYQHTMLFEFSIE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0709 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
Psa1g0709 339 SUPERFAMILY Galactose mutarotase-like 4 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Psa1g0709 339 PANTHER ALDOSE-1-EPIMERASE 7 338 - -
Psa1g0709 339 CDD galactose_mutarotase_like 14 336 - -
Psa1g0709 339 Pfam Aldose 1-epimerase 11 334 IPR008183 GO:0005975|GO:0016853
Psa1g0709 339 PANTHER ALDOSE 1-EPIMERASE 7 338 - -
Psa1g0709 339 Gene3D - 1 339 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0709 Psa-Chr1 46234614 46237436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0709 6 337 Miscellaneous Gene Families AT3G47800 50.000 1.64e-110 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0709 K01785 - gmx:100809972 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0709 1 46234614 46237436 Psa1g0709 1 46234614 46237436 ECH