Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0636 ATGAACATGGATTACAAATCGCTATCTTCTATCTCCGTTTCAGATATTGAATCCCTTGGAATTTCAACACACCACGCTGCAACTCTCCACCACCGTCTCACAGAACTAATCGGAATTCATGGAGCTGACGCGCCTGCCACGTGGCAGAGCATCACCACCAACATCCTCAACCCACAACTACCTTTCTCGTTTCATCAGATGCTCTACTATGGCTGCTTCAAGGATTATGGTCCGGACCCGCCCGCTTGGTTACCCGACCCGAAAACTGTTAGTTTGACGAATGTTGGCCGGTTACTTGAGAGGAGGGGTAAAGAGTTTCTGGGTTCAGCGTATAAGGATCCGATTACAAGTTTTACTGATTTCCACAAATTTTCACTCTCAAACCCTGAGGTTTATTGGAAAACTGTGCTCGATGAAATCAACATATCGTTTTCTAAACCACCCGAATGCATTTTAAGTGAGAATCTCAGCGAGGACGGTTCTTCTTCTTACCCCAGTGGTCGATGGCTTCCCGGAGCATCGGTTAATCCTGCACTCAATTGCTTGAATTTGAAAGGCAAAAGAAGTTTGAATGACACGGTAATAATATGGCGCGATGAATTGCAAGATGATCTTCCTCTTCAAAGGATGACACTTGAGGAATTGCGTCAAGAGGTTTGGTTAGTTGCCTATGCTCTTGAATCACTGGGTCTGGAGAAAGGATCTGCAATTGCGATTGATATGCCAATGAATTGTAAATCTGTTGTCATCTATCTGGCTATCGTTCTTGCAGGTTATGTTGTTGTATCGATAGCTGATAGTTTTGCAGCACGTGAAATATCAACCAGGCTTAAAATATCAAATGCAAAAGTCATATTTACTCAGGATCTCATACTTCGTGGCGATAAAGCCCTCCCACTTTACAGTAGAATTGTGGAAGCACAATCTCCTACGGCAATAGTTATCCCAACAAGTGGCTCTGGATTTAGCATGAAACTGCGGAATGGGGACTTTTCTTGGTGTGATTTTTTGGAGAGAGTCAGTAAAATCAAAGGCAAGGAATTCATAGCTGCGGAACAACCAGTAGAAACATTTACAAACATTCTCTTTTCTTCTGGAACAACAGGTGATCCGAAGGCAATTCCGTGGACCAATATTACACCACTAAAAGCTGCTGCAGATGCATGGTGCCACTTGGATATTCGTGAAGGTGATGTAGTTTCCTGGCCCACTAATCTTGGATGGATGATGGGACCATGGCTAGTATATGCATCTTTGCTAAATGGAGCTTCAATGGCTTTGTATAATGGATCCCCACTTGGGTCTGGTTTTGCCAAGTTTGTACAGGATGCTAAAGTAACAATGCTCGGTGTGATTCCAAGTCTTGTACGGAGCTGGAGAAACGCAAATTCCACATCCGGCTATGATTGGTCTGCTATTCGTTGCTTTGCATCCACTGGAGAAGCATCTAACATAGATGAATACCTGTGGCTGATGGGAAGAGGTAGTTACCAGCCTATCATTGAATATTGTGGTGGTACAGAGATTGGGGGTGCATTCATCACTGGATCATTGCTGCAGGCTCAGTCATTAGCTGCTTTTAGCACACCAGCTATGGGCTGCAATTTGTTTATTCTTGGTGAAGATGGGCATCCTATTCCACATAATGCTCCAGGAATAGGTGAGTTAGCTCTTGGCTCCCTTATGCTTGGGGCATCAAATGCATTGCTGAATGCTGATCATTATGGTGTCTACTTCAAGGGAATGGCTCTTTGGGATGGAAGGGTTTTACGGAGGCATGGAGATGTATTTGAGCGTACTGCTAGAGGATACTATCATGCGCATGGTCGTGCAGATGATACGATGAACCTTGGAGGAATTAAGGTGAGTTCGGTTGAGATTGAACGCATATGCAATGGAGTAGATAGTAATATTGTGGAAACAGCTGCAATAGGGATACCGCCTTCTGGTGGTGGGCCGGAGCAGTTGGCTATAGCTGCTGTGTTAAAGAACTCAAACGCCACAGCACAAGATTTACAGAAATTGAAGATGTCTTTTAATTCAGCTCTCCAAAAAACACTAAATCCATTATTCAGGGTCTCTCGAGTAGTACCAGTGGCATCTCTTCCAAGGACGGCATCCAACAAGGTTATGAGAAGGGTTTTGCGGCAGCAACTTGCGGAACATAGCCAAAGTTCTAAAATATGA 2187 0.4412 MNMDYKSLSSISVSDIESLGISTHHAATLHHRLTELIGIHGADAPATWQSITTNILNPQLPFSFHQMLYYGCFKDYGPDPPAWLPDPKTVSLTNVGRLLERRGKEFLGSAYKDPITSFTDFHKFSLSNPEVYWKTVLDEINISFSKPPECILSENLSEDGSSSYPSGRWLPGASVNPALNCLNLKGKRSLNDTVIIWRDELQDDLPLQRMTLEELRQEVWLVAYALESLGLEKGSAIAIDMPMNCKSVVIYLAIVLAGYVVVSIADSFAAREISTRLKISNAKVIFTQDLILRGDKALPLYSRIVEAQSPTAIVIPTSGSGFSMKLRNGDFSWCDFLERVSKIKGKEFIAAEQPVETFTNILFSSGTTGDPKAIPWTNITPLKAAADAWCHLDIREGDVVSWPTNLGWMMGPWLVYASLLNGASMALYNGSPLGSGFAKFVQDAKVTMLGVIPSLVRSWRNANSTSGYDWSAIRCFASTGEASNIDEYLWLMGRGSYQPIIEYCGGTEIGGAFITGSLLQAQSLAAFSTPAMGCNLFILGEDGHPIPHNAPGIGELALGSLMLGASNALLNADHYGVYFKGMALWDGRVLRRHGDVFERTARGYYHAHGRADDTMNLGGIKVSSVEIERICNGVDSNIVETAAIGIPPSGGGPEQLAIAAVLKNSNATAQDLQKLKMSFNSALQKTLNPLFRVSRVVPVASLPRTASNKVMRRVLRQQLAEHSQSSKI* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0636 728 Coils Coil 198 218 - -
Psa1g0636 728 Gene3D - 104 612 IPR042099 -
Psa1g0636 728 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 5 728 - -
Psa1g0636 728 Pfam AMP-binding enzyme 206 617 IPR000873 -
Psa1g0636 728 ProSitePatterns Putative AMP-binding domain signature. 361 372 IPR020845 -
Psa1g0636 728 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 5 728 - -
Psa1g0636 728 SUPERFAMILY Acetyl-CoA synthetase-like 118 721 - -
Psa1g0636 728 Gene3D - 613 728 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0636 Psa-Chr1 39589143 39595584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0636 3 591 Acyl Lipid Metabolism Gene Families AT5G23050 67.627 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0636 - - gmx:100795985 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0636 1 39589143 39595584 Psa1g0636 1 39589143 39595584 ECH