Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0628 ATGGAAGTGACCAACAAATACATAGTGATAAAAAATCACATTGAAGATGCACCAAAAGAGTCCCATTTTGAGGTCAAAACTGAGCCTTTTGCTCTTTCATTGGACCCGGGTTCCGATGATGTCATTGTCAAGAATTTATACATCTCGATTGATCCATATCTTATCAACCGCATGAAAATCTACAGCGCCTCCCACAAAGCTATAAGCTTTGCAACTCCCTTAACTTCCGGCGAGGCTATTGATGCTATTGTTATTGGAAAGGTTGTGACATCTGGGAATGCTAAGTTTGAAAAAGATGATTTGGTTTTGGGAGTATTCACTTGGGCTGAGTACAGTGTGGTTAAGGAACAAAGCATAATAAAAAAATTAGAGACTTCTCAATTTCCACTCACTTATCATCTTGGAGTTCTTGGGTTTAGTGGATTGTCAGCTTATGCTGGATTTTTTGAAATTTGCAAACCTCAAAAGGGTGAAAAGGTATTTGTTTCAGCAGCATCTGGGTCTGTTGGAAATATTGTAGGACAATATGCAAAACTCTTGGGTTGTTATGTTGTTGGTTGTGCTGGGAGTCAAAAAAAGGTGGCATTACTCAAAGAGAAATTAGGATTTGATGATGCCTTTAACTACAAGGAAGAAACAGATCTTAACTCCACTCTTAAAAGGTACTTTCCGGATGGAATTGACATATATTTCGACAACGTTGGAGGGAAAATGCTAGAAGCAGCAGTTGCTAACATGAAAGCATTTGGTAGAGTTTCTGTTTGTGGTGTAATTTCTGAGTATACTGATGTTGGAAAGAGAGCATCACCTGATATGATGGATGTTGTGTATAAGAGAATCACCATTAGAGGATTTCTGGCTGCTGATTTTTTGAATGTTTTTGCTGAATTTTCTGCTAAAACATTGGATTATCTTCGCAATGGCCAGTTAGAGGTGATTGAAGACAAGTCATTTGGTGTAGAGAGCATCCCTTCTGCATTTGTTGGGCTTTTCAATGGAGATAATGTTGGAAAGAAAGTTGTAGTTTTAGCAGAAGAGTGA 1041 0.3823 MEVTNKYIVIKNHIEDAPKESHFEVKTEPFALSLDPGSDDVIVKNLYISIDPYLINRMKIYSASHKAISFATPLTSGEAIDAIVIGKVVTSGNAKFEKDDLVLGVFTWAEYSVVKEQSIIKKLETSQFPLTYHLGVLGFSGLSAYAGFFEICKPQKGEKVFVSAASGSVGNIVGQYAKLLGCYVVGCAGSQKKVALLKEKLGFDDAFNYKEETDLNSTLKRYFPDGIDIYFDNVGGKMLEAAVANMKAFGRVSVCGVISEYTDVGKRASPDMMDVVYKRITIRGFLAADFLNVFAEFSAKTLDYLRNGQLEVIEDKSFGVESIPSAFVGLFNGDNVGKKVVVLAEE* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0628 346 Pfam N-terminal domain of oxidoreductase 6 120 IPR041694 -
Psa1g0628 346 Gene3D - 8 341 - -
Psa1g0628 346 SMART PKS_ER_names_mod 16 341 IPR020843 GO:0016491
Psa1g0628 346 Gene3D - 136 312 - -
Psa1g0628 346 PANTHER PROSTAGLANDIN REDUCTASE 2 344 IPR045010 GO:0016628
Psa1g0628 346 SUPERFAMILY GroES-like 3 153 IPR011032 -
Psa1g0628 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 309 IPR036291 -
Psa1g0628 346 PANTHER OS06G0602900 PROTEIN 2 344 - -
Psa1g0628 346 Pfam Zinc-binding dehydrogenase 169 290 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0628 Psa-Chr1 39027062 39029034 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0628 - - gmx:100808819 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0628 1 39027062 39029034 Psa1g0628 1 39027062 39029034 ECH