Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0616 ATGGGGACGAAGAGCAACTTCAATTCTATATCCCAATCTCGAAAAGAAAATACAAATAACAAAAAGAACAACAATAACACAAATGTTGTGTTGAATGTTTATGATCTCACCCCTCTCAATAATTACTTATATTGGTTGGGATTTGGAATCTATCACTCTGGCATTCAAGTACATGGTAAGGAGTATGGATTTGGAGCTCATGACTTCTCATCAAGTGGAGTATTTGAAGTGGAGCCAAGGAAGTGCCCTGGTTTTATGTACAGAACTTCTGTCCCTTTGGGCCAAGTAAACATGCAACCTTCCGAGTTTCGGACATTTATCGAAAACATGGCTAGTGAGTATCATGGAGATACGTATCACCTTATATCCAAGAACTGCAATCATTTCACAGATGATATCTCAGGTAGATTGACCGGAAAACGCCTCCCTGGTTGGGTTAATCGTCTCGCTAGGCTAGGTTCCTTATGTAGCTGTCTACTTCCTGATAGTATTCAAGTAACTACGGTTAAACAGCTACCTGAATACCATTCTGAAGATGAAGTTACTGATTCTCTACCAACTGCGACGCCCGGTGAGTCGATGGATTTAGATGATGAACAAGCAAAATTCCTTCCGTCACCTCTTGCTACCACAGAAGATGTTTCTTTTGTTAAAGAGACTCAAGTGAAATGA 672 0.4033 MGTKSNFNSISQSRKENTNNKKNNNNTNVVLNVYDLTPLNNYLYWLGFGIYHSGIQVHGKEYGFGAHDFSSSGVFEVEPRKCPGFMYRTSVPLGQVNMQPSEFRTFIENMASEYHGDTYHLISKNCNHFTDDISGRLTGKRLPGWVNRLARLGSLCSCLLPDSIQVTTVKQLPEYHSEDEVTDSLPTATPGESMDLDDEQAKFLPSPLATTEDVSFVKETQVK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0616 223 MobiDBLite consensus disorder prediction 1 24 - -
Psa1g0616 223 ProSiteProfiles PPPDE domain profile. 27 164 IPR008580 GO:0008233
Psa1g0616 223 Pfam PPPDE putative peptidase domain 28 162 IPR008580 GO:0008233
Psa1g0616 223 MobiDBLite consensus disorder prediction 175 198 - -
Psa1g0616 223 Gene3D PPPDE domains 21 177 IPR042266 -
Psa1g0616 223 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 17 223 - -
Psa1g0616 223 PANTHER DESUMOYLATING ISOPEPTIDASE 17 223 IPR008580 GO:0008233
Psa1g0616 223 SMART DUF862_2a 27 165 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0616 Psa-Chr1 38229607 38231599 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0616 K22763 - gmx:100778961 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0616 1 38229607 38231599 Psa1g0616 1 38229607 38231599 ECH