Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0615 ATGAACTTTGCTGCACCATCAATCGGTTCTGTTGGTGGTAGATCTGCTGCAAGAGCATTTGAGTTTGGAAGAACCTATGTAGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTTTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGTTATTAGAGACACTTCCTCTTCCAAATATTAAATGGATATGTCCAACTTCTCCTACCCGACCATTGTCTGTATTTGGTGGTTTTCCTTCTACCGCTTGGTTTGATGTGGAAGAACTTTCTGAAGAAGCTCCCGATGATCTTGAAGGTTTGGATGCTTCAGCAGCACATGTTGCCAATTTGTTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTTAGTATGGGAGCAGCGACTGCCCTTTACTCAGCATCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATGCTTATCCAGCCAACATAAGTGCGGTTGTTGGTTTAAGTGGCTGGCTTCCATGTTCAAAGACCTTGAGTGACAAGTTACGAGGTGTAGATGAAGCTACGAGGCGTGCTCAGTCTTTTCCCATTTTGATGTGTCATGGAAAAGGTGATGATGTGGTTCCATATAAGTTTGGTGAGAAATCATCGAAATGCTTAAGTTCTAATGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGCCACTACACAATTCCAGAAGAGACGGATAATGTTTGTGCTTGGCTAACATCAAAATTGGGACTTGAGGGCAATGCTGCTGCATAG 780 0.4372 MNFAAPSIGSVGGRSAARAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTSPTRPLSVFGGFPSTAWFDVEELSEEAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSASCFTAGKYGNGNAYPANISAVVGLSGWLPCSKTLSDKLRGVDEATRRAQSFPILMCHGKGDDVVPYKFGEKSSKCLSSNGFQDVTFKAYNGLGHYTIPEETDNVCAWLTSKLGLEGNAAA* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0615 259 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Psa1g0615 259 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Psa1g0615 259 Gene3D alpha/beta hydrolase 16 252 IPR029058 -
Psa1g0615 259 Pfam Phospholipase/Carboxylesterase 26 244 IPR003140 GO:0016787
Psa1g0615 259 SUPERFAMILY alpha/beta-Hydrolases 26 251 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0615 Psa-Chr1 38220635 38225107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0615 1 255 Acyl Lipid Metabolism Gene Families AT5G20060 72.157 1.39e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0615 K06130 - gmx:100791683 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0615 1 38220635 38225107 Psa7g5843 7 484621186 484624222 ECH
Psa1g0615 1 38220635 38225107 Psa1g0615 1 38220635 38225107 ECH