LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa1g0586	ATGCAAGGGAGTTCGAATGCTTCGGAATCATCAATGGTGATAGAAACCCTAAGAAGTAAGGGTTGGTATTTGGAAGACACCGACGATCTTAAGGCAATCATCGTTATTCAAACTGCATTAGCCGATGACAGTTCCAAGGTGTTACAGTCCGTCGAATCGGAGCTCCTCAATTCCGACCTCAGATCCATCGGAGCCAAGTCCTTACCCGAACCAACTCTTCTTCGTAACCCTTCCTTTTATCTCCAGGGACCTAAAGTTCTTCAGATTTCTTCGGTGAGGGACATTTCCATGAGCAGTGTGGATAACATTTCGAGAAATTCAAGTGGTCGAAGAGTTCTGAGATTGTGTCTCACGGATGGTCACTCTGAGATAACTGCCGTGGAATATTCTCACATTCCGTTTATACCTGACAATGTTGTTCCTGGTACTAAGATTCGTTTGGAAAATAAAGTTCCGGTTCATAGTGGTATAGCTTGCTTAAATCCAAAAGCATTGACTGTATTAGGGGGTGTTGTTCAATCACTATATGAAGAATGGCAGATGAACCAAAAATATTCAGGGTTCTCCCGGTCATCTTTAAGACAACTAGAGGATCGTGATTCAGGTGGTCCTCCTCCATTTGTGAAGCTGCAGGTTGGATCTATCTCAGGTTATGCAAATAATAACTCTAGAAGTAGTAAGCCCATTGCTGGTACTGGTAGAGGTGAGGTGAGGCCAACTGGCATCCAGCAAGACCGAAATTTGAAAGAAGATATTGTGGACGCAAATCTAAAATCCAAATTGCCTCCAGAACGAGCTGAAGACAAACCTAGTAATTCAGGGTTAAGGCCAAAAGAAAGAGCTGAAGACAAACCTAGTAGTTCGAGTACAAGGCCAAAAGAAGTTGTGGAATCTGTTCCTGTGCAAAATCAAGCAGCTGCCCAAAAATTACTTCAGAAACTGAATCAACCAAATCAGCGTGATCGGCATCCTAGGGGTCGGAGATATAGGGGAAAGGGTCAAGAAGAAGATGAAGTTGTATTTACACTTGAAGAATATGAAAAAAGACAGACCCAAGTAAAGCCTTCTTATAATGGCGAGGCTCTAAATATTAGCCGTGATGAGCATCTTGCTAGGCAGCTTCAAAATCAATTTAACCTTGAACATTCTCAGGTGGAAAGGGCCCCTCGTGAATCTGAAGCAGAGAATATTCGAATGAATATGTTCACATATGAAAAGGATTCTGACGACAGCTATCAAACGGGAAGAGGCGGAAGGGGTAGAGGTAGAGGAAGGGGAAGGGGAAGGGGTAGAGGAAGAGGGAGAGGAAGACATGGTTAA	1320	0.4341	MQGSSNASESSMVIETLRSKGWYLEDTDDLKAIIVIQTALADDSSKVLQSVESELLNSDLRSIGAKSLPEPTLLRNPSFYLQGPKVLQISSVRDISMSSVDNISRNSSGRRVLRLCLTDGHSEITAVEYSHIPFIPDNVVPGTKIRLENKVPVHSGIACLNPKALTVLGGVVQSLYEEWQMNQKYSGFSRSSLRQLEDRDSGGPPPFVKLQVGSISGYANNNSRSSKPIAGTGRGEVRPTGIQQDRNLKEDIVDANLKSKLPPERAEDKPSNSGLRPKERAEDKPSSSSTRPKEVVESVPVQNQAAAQKLLQKLNQPNQRDRHPRGRRYRGKGQEEDEVVFTLEEYEKRQTQVKPSYNGEALNISRDEHLARQLQNQFNLEHSQVERAPRESEAENIRMNMFTYEKDSDDSYQTGRGGRGRGRGRGRGRGRGRGRGRHG*	440

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa1g0586	439	MobiDBLite	consensus disorder prediction	316	336	-	-
	Psa1g0586	439	MobiDBLite	consensus disorder prediction	243	290	-	-
	Psa1g0586	439	MobiDBLite	consensus disorder prediction	402	439	-	-
	Psa1g0586	439	Pfam	RecQ mediated genome instability protein	43	180	IPR013894	-
	Psa1g0586	439	Gene3D	-	59	188	IPR042470	-
	Psa1g0586	439	PANTHER	SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED	13	412	-	-
	Psa1g0586	439	PANTHER	RE01471P	13	412	-	-
	Psa1g0586	439	MobiDBLite	consensus disorder prediction	402	416	-	-
	Psa1g0586	439	MobiDBLite	consensus disorder prediction	218	336	-	-
	Psa1g0586	439	SMART	DUF1767_2	14	104	IPR033472	-
	Psa1g0586	439	MobiDBLite	consensus disorder prediction	420	439	-	-
	Psa1g0586	439	MobiDBLite	consensus disorder prediction	291	315	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa1g0586	K18404		-	gmx:100782461	511.916

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa1g0586	1	35004627	35014861	Psa1g0586	1	35004627	35014861	ECH