Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0553 ATGTCAATTGTATTCTCCTCCTCGGCTACAAAATTTTCTTCACTATTTCCTACTTACCGTCAAACCTCTCCGTGCCGTCGAATTGGAAGTTGGAGCTTGAAATCGAGGACGCAACTATGTAAGAACTCTTTGCAATCTCAAATTTACACAAATCATAACTTTCCAAGGATTGCTTCAACCTCCACCGGACCTATTCCACCTGCTCATCTCATTCAAGTCGCTACAACTGCTGCTCAGACCGGTGCTCAGGTTGTGATGGATGCTGTTAATAAGCCGCGGAATATTACATATAAAGGATTAACTGACTTGGTGACTGAGACAGATAAAATGAGTGAAGCTGCCATATTAGAAGTGGTGAAAAAGAATTTTGAAGATCACCTTATTCTTGGGGAAGAAGGAGGCATTATAGGAGAAGTAGCTTCTGATTATCTCTGGTGCATTGATCCCTTAGATGGGACAACAAACTTTGCACATGGCTATCCCAGCTTTGCAGTTTCTGTTGGGGTTCTATATCGAGGAAAACCTACTGCTGCTACAGTGGTTGAGTTTGTTGGTGGTCCTATGTGTTGGAATACTCGCATTTTCACTGCAACTGCCGGCGGTGGAGCATTCTGCAACGGCCAAAGGATCCAAGTTAGTGCAACTAATGAGGTGGAACGATCTCTTCTAGTGACGGGTTTTGGGTATGATCATGATGAAGCCTGGGCTACTAACATAGACTTATTCAAAGAATTTACAGACGTCAGCAGGGGTGTAAGACGGCTTGGTGCAGCTGCAGTGGACATGTGTCATGTGGCTTTAGGAATTGTAGAAGCTTATTGGGAATATCGTCTAAAGCCATGGGATATGGCTGCTGGTGTTTTGATGGTAGAGGAAGCTGGTGGCACAGTTTCTCGGATGGATGGCGGAAAGTTTTGTGTTTTTGATAGATCTGTTTTGGTTTCAAACGGTGTGCTCCATGGAAAGCTTCTGGAGAGAATTGGACCTGCGACTGAGAAATTAAAAAGCAATGGAATTGATTTCTCATTATGGTACAAACCTGAGGACTACACAGCTGACGTTTAA 1065 0.4366 MSIVFSSSATKFSSLFPTYRQTSPCRRIGSWSLKSRTQLCKNSLQSQIYTNHNFPRIASTSTGPIPPAHLIQVATTAAQTGAQVVMDAVNKPRNITYKGLTDLVTETDKMSEAAILEVVKKNFEDHLILGEEGGIIGEVASDYLWCIDPLDGTTNFAHGYPSFAVSVGVLYRGKPTAATVVEFVGGPMCWNTRIFTATAGGGAFCNGQRIQVSATNEVERSLLVTGFGYDHDEAWATNIDLFKEFTDVSRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLMVEEAGGTVSRMDGGKFCVFDRSVLVSNGVLHGKLLERIGPATEKLKSNGIDFSLWYKPEDYTADV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0553 354 ProSitePatterns Inositol monophosphatase family signature 2. 281 295 IPR020550 GO:0046854
Psa1g0553 354 Gene3D - 211 334 - -
Psa1g0553 354 Gene3D - 68 210 - -
Psa1g0553 354 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 81 100 IPR020552 GO:0046854
Psa1g0553 354 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 202 220 IPR020552 GO:0046854
Psa1g0553 354 Pfam Inositol monophosphatase family 70 326 IPR000760 GO:0046855
Psa1g0553 354 PRINTS Inositol monophosphatase superfamily signature 102 122 IPR000760 GO:0046855
Psa1g0553 354 PRINTS Inositol monophosphatase superfamily signature 124 140 IPR000760 GO:0046855
Psa1g0553 354 PRINTS Inositol monophosphatase superfamily signature 145 161 IPR000760 GO:0046855
Psa1g0553 354 PRINTS Inositol monophosphatase superfamily signature 200 223 IPR000760 GO:0046855
Psa1g0553 354 PRINTS Inositol monophosphatase superfamily signature 247 268 IPR000760 GO:0046855
Psa1g0553 354 PRINTS Inositol monophosphatase superfamily signature 278 302 IPR000760 GO:0046855
Psa1g0553 354 PANTHER PHOSPHATASE IMPL1, CHLOROPLASTIC 49 352 - -
Psa1g0553 354 SUPERFAMILY Carbohydrate phosphatase 67 331 - -
Psa1g0553 354 ProSitePatterns Inositol monophosphatase family signature 1. 145 158 IPR020583 -
Psa1g0553 354 PANTHER INOSITOL MONOPHOSPHATASE 49 352 - -
Psa1g0553 354 CDD IMPase 70 316 IPR033942 GO:0008934|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0553 Psa-Chr1 33257978 33268659 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0553 K01092 - gmx:100796770 568.54