Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0546 ATGAACTCGCCGTCATCATCATCGTCGTCGTCGACGGGAGACGCCAGCAAGATAGCGACGAGGTCTTCCATTGTGGAGTCGATTAGGGGATGCGGCATGACGAGTACGCGCGTCGACAAGGAGGAGCTAAAGCGGTGTCTCACCATGCCGCAGTACCTACGGACCGCAATGCGGGACTCTATCCGGTTGCAGGATCCCAACGCTGGCGAGGGCGGTTGTATTCGTGAAGGAGGCGAAGAGAATGATGTTGCTCCTCTTACGCCAATGGTTGTTTTCATTAACCCCCGCAGTGGTGGCCGCCATGGCGCTGACCTCATGGAACGGCTCCAGGATCTCATGAGTGACGAACAGGTTTTTGATATATTAGATGTGAAGCCTCATGAGTTTATCCAGTATGGGTTAAGTTGCTTCGAGACATTAGCTAGTTCTGGTGATACTTGTGCCAAAGAAACACGTGAGAGAATAAGGATAATGGTTGCGGGAGGTGATGGTTCAGTTGGCTGGGTTTTAGGATGTCTCACTGAACTTAACACACAGGGCCGGGAACCAGTTCCTCCTGTAGGAATCATACCACTTGGTACAGGAAATGACCTGTCTAGGTGTTTTGGTTGGGGTGGTTCATTTCCATTTGCATGGAAAGCAGCTATTAAGAGAACTCTTCACAAGGCTAGTATTGGTCCAATTTATCGTTTGGATAGTTGGCGAGTTTCACTTTCAATGCCCGAAGGCACAACTGTTGAACCACCTTATTCTCTAAAGCAGACAGAAGAGTTCTCTCTTGATGAGAGCTTAGAAGTTGAGGGAGAACTACCCGAGAAAGTTATATGTTATGAAGGCGTGTTCTACAATTACTTTAGCATAGGTATGGATGCCCAAGTGGCTTATGGCTTTCATCACCTGCGTAATGAAAAACCTTACCTTGCCCAAGGACCAATAGCAAATAAGCTTATATATTCTGGTTATACTTGCACTCAGGGTTGGTTCTTCACACCCTGCACAAGTGACCCAGGTTTTAGGGGACTTAAGAACATTATGCGGATGCATGTCAAAAAGATCAATAGCTCTGAATGGGAGCTGGTTCCAGTTCCTACAAGTGTAAGGGCAGTAGTTGCTCTGAATCTTCATAGTTATGGAAGTGGGAGAAACCCATGGGGTACTCTGAAACCTGAGTATTTGGAAAAGAGAGGCTTTGTTGAAGCTCGAGTTGATGATGGACTTCTGGAAATATTTGGTCTAAAGCAAGGATGGCATGCATCATTTGTGATGGTTGAACTGATATCTGCAAAGCACATAGCTCAGGCAACAGCTATCCGGTTGGAAGTAAGAGGAGGGGAGTGGACGGATGCATATATGCAAATGGATGGTGAACCTTGGAAACAACCATTGAGCAAAGACTTCTCGACATTCGTGGAACTAAGGAGGGAACCTTTCCAGTCACTTGTGATTAGTGGAGAATGA 1458 0.4671 MNSPSSSSSSSTGDASKIATRSSIVESIRGCGMTSTRVDKEELKRCLTMPQYLRTAMRDSIRLQDPNAGEGGCIREGGEENDVAPLTPMVVFINPRSGGRHGADLMERLQDLMSDEQVFDILDVKPHEFIQYGLSCFETLASSGDTCAKETRERIRIMVAGGDGSVGWVLGCLTELNTQGREPVPPVGIIPLGTGNDLSRCFGWGGSFPFAWKAAIKRTLHKASIGPIYRLDSWRVSLSMPEGTTVEPPYSLKQTEEFSLDESLEVEGELPEKVICYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPIANKLIYSGYTCTQGWFFTPCTSDPGFRGLKNIMRMHVKKINSSEWELVPVPTSVRAVVALNLHSYGSGRNPWGTLKPEYLEKRGFVEARVDDGLLEIFGLKQGWHASFVMVELISAKHIAQATAIRLEVRGGEWTDAYMQMDGEPWKQPLSKDFSTFVELRREPFQSLVISGE* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0546 485 PANTHER DIACYLGLYCEROL KINASE 7 484 IPR037607 GO:0004143|GO:0007165
Psa1g0546 485 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 88 461 IPR016064 -
Psa1g0546 485 Pfam Diacylglycerol kinase accessory domain 280 457 IPR000756 GO:0004143|GO:0007205
Psa1g0546 485 SMART dagk_c4a_7 88 234 IPR001206 GO:0016301
Psa1g0546 485 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 84 241 IPR001206 GO:0016301
Psa1g0546 485 MobiDBLite consensus disorder prediction 1 21 - -
Psa1g0546 485 PIRSF DAG_kinase_plant 4 485 IPR016961 GO:0004143
Psa1g0546 485 Gene3D - 276 464 - -
Psa1g0546 485 Gene3D - 87 230 IPR017438 -
Psa1g0546 485 PANTHER DIACYLGLYCEROL KINASE 7 484 - -
Psa1g0546 485 SMART dagk_c4b_2 280 457 IPR000756 GO:0004143|GO:0007205
Psa1g0546 485 Pfam Diacylglycerol kinase catalytic domain 88 227 IPR001206 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0546 Psa-Chr1 33104900 33119748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0546 9 485 Acyl Lipid Metabolism Gene Families AT5G57690 66.392 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0546 K00901 - gmx:100794923 806.979