Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0524 ATGGCAGGTGGGGGTTTTACAACAGATACTGTGGGGAAGGAAAGGGCAAATCTTTATAAAGGGAGAGTTACTCCTTATGTTATCATTGCTTGCATTGTTGCCGCTATTGGAGGATCATTATTTGGATATGATATTGGAATTTCAGGTGGGGTGACTTCCATGGATGACTTCCTTGAAGAATTCTTCCCAGAAGTATTCATGCAAAAAAAACATGCACACGAGAATAACTACTGCAAATACGACAGTCAGAGTCTTGCTGCCTTTACATCTTCTCTTTACATCGCTGGTTTAGTTGCATCTCTGGTTGCATCTCCTATTACAAGAAAGTATGGACGTCGGATGAGTATCATCGCTGGTGGTGTCAGCTTTCTGATTGGATCAATTCTGAATGCTGCAGCCATTAGCCTAGCAATGCTGATATTCGGCCGCGTTATGCTCGGTATTGGCATCGGATTTGGAAATCAGGCAATTCCGCTTTATTTATCAGAGATGGCACCAACACACCTGCGAGGAGGATTGAACATGATGTTTCAAATGGCGACAACTCTTGGGATTTTCGCAGCCAATATGGTGAATTTCGGAACACAGAATATTAGACCTTGGGGATGGAGGCTGTCCCTAGGCTTGGCTGCAGTACCGGCTCTTCTGATGATGATAGGAGGAGTATTTCTTCCCGATACTCCAAATAGCTTAATAGAACGTGGATTGAAAGAAAAAGGAAGGAAACTCCTAGAGAAAATCAGAGGAACTACCGAGGTTGATGCAGAGTTTGACGATATGGTTGAGGCAAGTGAGTTGGCGAACTCGATAAAGCACCCGTTTCGTAACATCCTTGAGAAAAGATATAGACCGGAGTTGGTTATGGCAATTGTCATGCCAACTTCACAGATCTTGACTGGCATAAATTCCATTCTCTTTTATGCTCCAGTGCTTTTCCAAAGCATGGGATTCGGCAGCCATGCTTCCCTCTACTCCTCCGCTTTGACCGGCGGCGTTCTTGCTTGCTCGACATTCCTTTCCATTGCAACAGTTGATAGATTGGGAAGGAGAGTTCTTCTCATCAGCGGTGGAATACAAATGATCATATGCCAGGTTATAGTTGCAATAATTCTAGGGATCAAGTTTGGGGATAACCAGGCACTGTCGAGAGGCTATTCGATATTGGTAGTAGTTGTGGTTTGCCTCTTTGTTGTAGCATTTGGATGGTCGTGGGGCCCCCTTGGATGGACAATTCCAAGCGAAATATTTCCGTTGGAAATCCGTTCTGCTGGGCAAAGTATCACAGTTGCTGTAAACCTTCTGTTTACTTTCATAATTGCTCAAGCATTCCTTACTCTTCTCTGCGCGTTGAAATTTGGGATCTTTCTCTTTTTCGCCAGCTGGATTGTCATCATGACCGTATTTGTTATGCTATTCTTGCCTGAAACCAAAGGTATTCCCATTGAAGAGATGGCATTTATGTGGCAGAAGCATTGGTTCTGGAAACTGATACTACCTCAAGGCGAGCTGTAA 1512 0.4398 MAGGGFTTDTVGKERANLYKGRVTPYVIIACIVAAIGGSLFGYDIGISGGVTSMDDFLEEFFPEVFMQKKHAHENNYCKYDSQSLAAFTSSLYIAGLVASLVASPITRKYGRRMSIIAGGVSFLIGSILNAAAISLAMLIFGRVMLGIGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQMATTLGIFAANMVNFGTQNIRPWGWRLSLGLAAVPALLMMIGGVFLPDTPNSLIERGLKEKGRKLLEKIRGTTEVDAEFDDMVEASELANSIKHPFRNILEKRYRPELVMAIVMPTSQILTGINSILFYAPVLFQSMGFGSHASLYSSALTGGVLACSTFLSIATVDRLGRRVLLISGGIQMIICQVIVAIILGIKFGDNQALSRGYSILVVVVVCLFVVAFGWSWGPLGWTIPSEIFPLEIRSAGQSITVAVNLLFTFIIAQAFLTLLCALKFGIFLFFASWIVIMTVFVMLFLPETKGIPIEEMAFMWQKHWFWKLILPQGEL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0524 503 CDD MFS_STP 33 475 IPR044778 GO:0015145|GO:0015749
Psa1g0524 503 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa1g0524 503 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa1g0524 503 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa1g0524 503 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa1g0524 503 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa1g0524 503 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa1g0524 503 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 477 IPR020846 GO:0022857
Psa1g0524 503 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 5 499 IPR045262 GO:0015144
Psa1g0524 503 Gene3D MFS general substrate transporter like domains 19 491 IPR036259 -
Psa1g0524 503 PANTHER - 5 499 - -
Psa1g0524 503 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa1g0524 503 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa1g0524 503 SUPERFAMILY MFS general substrate transporter 21 484 IPR036259 -
Psa1g0524 503 Pfam Sugar (and other) transporter 31 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0524 Psa-Chr1 32113792 32117647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0524 1 500 Organic Solute Cotransporters AT4G02050 77.800 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0524 K24193 - gmx:100820434 841.647