Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0513 ATGGAAAAACAAAAAGAGATGAAAGTTGTTGAGGGTTTAGATCTTGAAAGATATATGGGAAGATGGTACGAGATAGCTTCATTTCCATCAAGGGATCAGCCAAAGGATGGAGCAAACACAAGAGCAACATACAAACTCAACACGGATGGAACTGTTGATGTTCTTAATGAGACTTGGAGTGGTGGCAAAAGAGGTTTTATTCAAGGTTCTGCTTTTAAGGCTAACCCTAATAATGATGAAGCTAAATTCAAAGTCAAGTTTTACCTTCCTCCATTCCTTCCAATTATTCCTGTTACAGGGAATTATTGGGTTTTGTTTATTGCTCATGATTATCATTATGCTTTGATTGGTGAACCAACCAAGAAATCACTTTGGATATTATGCAGGGAGACTCGTTTAGATGATGAAATTTATGATGAAATTGTTGAGAAGGCAAAGGAAGAGGGATATGATGTTACCAAACTCCGCAAAACACCTCATACTGATCCACCCCCGGAGGAAGAAGGCCCCCAAGACAACAAAGGCATTTGGTGGTTTAAATCCATTTTTGGGAAATAG 558 0.3853 MEKQKEMKVVEGLDLERYMGRWYEIASFPSRDQPKDGANTRATYKLNTDGTVDVLNETWSGGKRGFIQGSAFKANPNNDEAKFKVKFYLPPFLPIIPVTGNYWVLFIAHDYHYALIGEPTKKSLWILCRETRLDDEIYDEIVEKAKEEGYDVTKLRKTPHTDPPPEEEGPQDNKGIWWFKSIFGK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0513 185 PIRSF Lipocalin_ApoD 1 171 IPR022271 -
Psa1g0513 185 Gene3D - 2 164 IPR012674 -
Psa1g0513 185 PANTHER LIPOCALIN-RELATED 4 185 - -
Psa1g0513 185 Pfam Lipocalin-like domain 13 159 IPR000566 -
Psa1g0513 185 ProSitePatterns Lipocalin signature. 12 25 IPR022272 -
Psa1g0513 185 SUPERFAMILY Lipocalins 6 163 IPR012674 -
Psa1g0513 185 MobiDBLite consensus disorder prediction 153 175 - -
Psa1g0513 185 CDD lipocalin_Blc-like 10 158 - -
Psa1g0513 185 PRINTS Bacterial lipocalin signature 13 27 IPR002446 -
Psa1g0513 185 PRINTS Bacterial lipocalin signature 50 59 IPR002446 -
Psa1g0513 185 PRINTS Bacterial lipocalin signature 122 133 IPR002446 -
Psa1g0513 185 PRINTS Bacterial lipocalin signature 149 159 IPR002446 -
Psa1g0513 185 MobiDBLite consensus disorder prediction 153 169 - -
Psa1g0513 185 PANTHER APOLIPOPROTEIN D 4 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0513 Psa-Chr1 31735517 31736836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0513 K03098 - csin:114287251 312.383