Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0504 ATGGTGGGAACAAACTTGAAGGCAGAAACTTCGTCTTTAATGGACAAACGGAGTTTGTTAGAGTCTGAAATGAACTCCATCATCGCCCGTCTTTCTCAACCCGGCGCCCCCGGTCTCTCCGGCAACCTCCTTGATTCTGAGGGTTTTCCTCGTTCTGATATCGATGTTCCAGTTGTTAGAGCAGAACGACGTCGCCTTGCAGAGCTGCGTAATGATTACACGGAGATAACAAAAAAGATTGATCAAAATGTACAAATTTTGCTTTCACCAAGACTAGGAAAGAATATATCAGGCATACATACCTCATCAACTGTAGAAGCTGTTGCATCAACACCATCACAGAATGTCCCTTTGAGTCCTTCCTCCAACTCAATGGCTGTGGATGTCTTGGTTAGTCGACCCTTTGCAGTGGTTGACGAGATATCAGATGCATCACCAGCAGTAGAGGATGGTTTACAACTTGGAGATCAAATTTTGAAATTTGGCAATGTTGAAGTGGGTGAAAATTTGCTCCCGAGGTTGGCTTCTGAGTCCCAGTCAAACATGGGTCAAGCAGTACCTGTTATCATCATGAGGCAAGGCACAGTGATCAACTTAACTATCACACCTAGAACTTGGCCAGGCAGAGGTTTACTGGGATGTCATTTTCGGATCTTGTAG 660 0.4485 MVGTNLKAETSSLMDKRSLLESEMNSIIARLSQPGAPGLSGNLLDSEGFPRSDIDVPVVRAERRRLAELRNDYTEITKKIDQNVQILLSPRLGKNISGIHTSSTVEAVASTPSQNVPLSPSSNSMAVDVLVSRPFAVVDEISDASPAVEDGLQLGDQILKFGNVEVGENLLPRLASESQSNMGQAVPVIIMRQGTVINLTITPRTWPGRGLLGCHFRIL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0504 219 Coils Coil 59 79 - -
Psa1g0504 219 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 1 218 IPR035269 GO:0070682
Psa1g0504 219 SUPERFAMILY PDZ domain-like 136 217 IPR036034 GO:0005515
Psa1g0504 219 Pfam PDZ domain 135 201 IPR001478 GO:0005515
Psa1g0504 219 Pfam Nas2 N_terminal domain 12 85 IPR040815 -
Psa1g0504 219 Gene3D - 116 218 IPR036034 GO:0005515
Psa1g0504 219 Gene3D - 2 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0504 K06693 - gmx:100803329 315.079