Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0491 ATGGCGAAACTGAAGATAGCGGGATCATGGTCCGGTGTATTAGAAGAAGTCGATTTGGCGATTTGGACCATATCTTCGTTACGCGAAGAAGTTGCCAAGCGATCCAATTGCGAAAACCCTCACTTCATCAACTTCATATGCGCTGGTAGAATTCTCAAGGACGATAACGGAACCCTAACTTTAACTCAATTGGGCGTTAAGAATAACTCCAAGATTCTCGCTACTCTCTCTTCTCCTCAACAGGGTCAGTCTCTTGTTGTGGAGGAACAAAGCTCTCACAGGCTTGCGCGTATCAGGTCAGCTGCAACTGCATTGGCTGAAAGGCATGCAGATGGTTCATTGCCTGTTGAAGATTTTAACATAGAAGTTGAAGATCAAAATGGACAGAAAGTACGCTTGGGATCAGAGCTTGATCAGAGGGCAGTGATGATGGGATTGATGCTTCATGCAAAGGGGAAGCGTCTTATCAAAGTGGGAAATTACAAAGATGCACTTGAAGTTCTTACTATGGGAGAGGAGGCATTCTCTATTTGTGATCCAAAAGTCATTGAGCTTATTGACAATGTCCCAATACTGCAAATTGACATGGTATGGTGCTACTTTATGCTACGAGACATTAGATGGCTATCAGATGCAGGGAACCGCCTTGAAATGGCTAGGGTAGGAATTGGACGTGCTCATGGGAAGGATTCTCTCCGCCTTAGACTCTTACAAGGTGGTCGCTATCCAGAACTTGCACTGCATTTGAGACTAGAACTTCTTGAAGGGGTGGTGGCATTTCATACTGGCCAGTTGGAAAAATCAAAGCAAGCATTAGCTTCTGCAATGGCAAAGTTTGTTCAGCTGCAAGTGCCTGATGAAGCATTATCACTTGTTATGAGCATGGGCTACAATCAACGTCATGCAAAGAGAGCATTACGAATGAATAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGTTGAGGAGAAGGCAAAGAAAATGCAAAAACAGGAGGAAGATTTAAAAAGAAGAGCTGAAATTATGGAGCAAAAGAAGTTTGGCGTGACCCCCTTAAAAAAGGCCGTGGATATGGAGAGACTGAAGGAATTGGTCACTATTGGGTTCGAAAAGGAGCTCGCTGCTGAAGCCCTTAGAAAAAATGAAAACGATACTCAGAAAGCATTGGATGATTTGACGAATCCAGAAACCAATTCTGATTTACAGGTTAATATCGAGACAAGGATAAGGAAAAGACAGAAACAAGCAAAAGATTCTGCAATTGAAAGAGTTGTGCAAATGGGGTTTGAAAGATCAAGAGTGATTGCTGCTTTTGAGGAAGACGGCGGGTTAGACAAAATATTGCAAAGACTGACAGCACAACCTGAGGCAGAGAATATTCAACCTCAAGTGAATTCAACTGTTGCTTCCCATGGCAGTGCAAGTTCATCTAACCCTTTACCAAATAATATTAGTTCTGATATTTTAGGCCCAATGAATGAGGTTGAAGATCACAATAAAGCTGAAGCAAGGGACGTGGAGATGGAAGATGAGCTCTCTGCAGATATAGCTAATGGTGATGCCTTCACTGATTATGACATTGAAGTTAATATAGAAGGGGATGCCATAACTGAGTACATGTCTATGATTGAGTCAGCAGGCATTACTTCCAAATAA 1656 0.4245 MAKLKIAGSWSGVLEEVDLAIWTISSLREEVAKRSNCENPHFINFICAGRILKDDNGTLTLTQLGVKNNSKILATLSSPQQGQSLVVEEQSSHRLARIRSAATALAERHADGSLPVEDFNIEVEDQNGQKVRLGSELDQRAVMMGLMLHAKGKRLIKVGNYKDALEVLTMGEEAFSICDPKVIELIDNVPILQIDMVWCYFMLRDIRWLSDAGNRLEMARVGIGRAHGKDSLRLRLLQGGRYPELALHLRLELLEGVVAFHTGQLEKSKQALASAMAKFVQLQVPDEALSLVMSMGYNQRHAKRALRMNNQDVGGAIDFLVEEKAKKMQKQEEDLKRRAEIMEQKKFGVTPLKKAVDMERLKELVTIGFEKELAAEALRKNENDTQKALDDLTNPETNSDLQVNIETRIRKRQKQAKDSAIERVVQMGFERSRVIAAFEEDGGLDKILQRLTAQPEAENIQPQVNSTVASHGSASSSNPLPNNISSDILGPMNEVEDHNKAEARDVEMEDELSADIANGDAFTDYDIEVNIEGDAITEYMSMIESAGITSK* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0491 551 Gene3D - 261 331 - -
Psa1g0491 551 Gene3D - 332 401 - -
Psa1g0491 551 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 283 323 IPR015940 -
Psa1g0491 551 SUPERFAMILY Ubiquitin-like 22 76 IPR029071 -
Psa1g0491 551 CDD UBA 361 390 - -
Psa1g0491 551 Gene3D - 16 84 - -
Psa1g0491 551 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 355 395 IPR015940 -
Psa1g0491 551 ProSiteProfiles Ubiquitin domain profile. 23 81 IPR000626 GO:0005515
Psa1g0491 551 Coils Coil 325 345 - -
Psa1g0491 551 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 546 IPR039749 -
Psa1g0491 551 SUPERFAMILY UBA-like 352 399 IPR009060 GO:0005515
Psa1g0491 551 SUPERFAMILY UBA-like 276 323 IPR009060 GO:0005515
Psa1g0491 551 SMART uba_6 285 322 IPR015940 -
Psa1g0491 551 SMART uba_6 357 394 IPR015940 -
Psa1g0491 551 SMART uba_6 417 449 IPR015940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0491 - - gmx:100792972 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0491 1 29317622 29324876 Psa1g0491 1 29317622 29324876 ECH