Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0486 ATGGGTTCTTTGGTTCAGATTCTGGGTCTGTTCTGTTTGGTATGTTTCAGCTTTTTTGTTGTGAACACAGTGAGTGAAAGTGTGAAGAAAGGGAGTGTTGTAATTGATGGGAGCTCTGTGATTGGAAATATTGATGATGATTTTGTTTGTGCTACTTTGGATTGGTGGCCTCCTCAAAAATGTGATTATGGTACTTGTAGTTGGGGTTTTGCTTCTCTTCTCAATCTGGATCTCAACAACAAGATTTTTTTAAATGCAGTGAAAGCCTTTACGCCATTGAAACTGAGATTAGGCGGAAGTTTGCAAGATAAGGTGATATATGGGACCGATGATTACAAACAACCATGCACTCCTTTTGTTCGAAACGAATCGGAAATGTTTGGATTCACACAAGGGTGCCTCCCGATGGCAAGATGGGATGAACTTAATGATTTCTTCCAGAAAGCAGGGGCTAACATTGTGTTTGGATTGAGTGCTCTTAATGGAAAGTCAATCCATTCTGGTTCTGCAATAGGCCCTTGGAATTACACCAATGCCGAATCGTTTATTAAATACACTGTTGGGAAGAACTATGACATTCGTGGATGGGAACTCGGCAACGAATTAAGCGGGAGTGGTGTTGGAACGCGTATTTCTGCAGACCAATATGCTTCTGATTTTGCTTCTTTAAGCAACATTGTTCAAAATGCATATAAAGACATTGAGCCTAAGCCATTAGTCATTGCTCCCGGAGGTTTCTTTGATGCAACTTGGTTCAAGGAGTTCATAACCAAATCTGGCAACTCTTTGGATGTCGTCACCCACCACATTTATAACCTTGGACCAGGAGTTGATACGCACCTTGTGGAAAAAATTCTGAATCCTTCATATCTTGATGGAGAGAAAAGTACATTCAAAGCCCTGAAAGATGTACTTGGAAGTACAGCAACTTCAGCAACATCGTGGGTTGGTGAGTCGGGAGGGGCTTATAACAGTGGCCATCATCTTGTATCCGATGCATTTGTGTACAGTTTTTGGTATTTGGATCAACTCGGTATGTCTGCGTCATACGACACTAAAACATACTGCAGACAGAGTTTGATTGGAGGAAACTATGGTTTACTCAATACTACCAATTTCCATCCAAATCCAGACTATTATAGTGCTCTTCTTTGGCACCGACTCATGGGAAGACGCGTACTATCAACTACCTTCTCAGGGACAAACAAGATACGAGCTTATGCACACTGCGCAAAGCAATCCAAAGGAATCACCATACTATTGATCAACCTAGACAACAGCACAACTATTGAAGCAACCTTTGGCAACACTAACAGTCTGTGGTACAGAAAGATGTCTTATAGTTCAAAAGTAATGAAACTACCTCTTCTCAGCGATAGTGAAACAACAAGAGAAGAATACCATCTAACTGCACAAAATGGAAACATACATAGCCAAATCATGTTACTGAATGGAAATGTTTTAACTGTAAATTCAGATGGTGAAATCCCTCCTTTGGAGCCAATAATTGTAAACTCATCAAAGCCAATAAGGGTTGCTCCTTTCTCTATTGTATTTTCTCATATACCTGATGCTGTTCTTTCGGCTTGCAGCTAG 1596 0.4066 MGSLVQILGLFCLVCFSFFVVNTVSESVKKGSVVIDGSSVIGNIDDDFVCATLDWWPPQKCDYGTCSWGFASLLNLDLNNKIFLNAVKAFTPLKLRLGGSLQDKVIYGTDDYKQPCTPFVRNESEMFGFTQGCLPMARWDELNDFFQKAGANIVFGLSALNGKSIHSGSAIGPWNYTNAESFIKYTVGKNYDIRGWELGNELSGSGVGTRISADQYASDFASLSNIVQNAYKDIEPKPLVIAPGGFFDATWFKEFITKSGNSLDVVTHHIYNLGPGVDTHLVEKILNPSYLDGEKSTFKALKDVLGSTATSATSWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSASYDTKTYCRQSLIGGNYGLLNTTNFHPNPDYYSALLWHRLMGRRVLSTTFSGTNKIRAYAHCAKQSKGITILLINLDNSTTIEATFGNTNSLWYRKMSYSSKVMKLPLLSDSETTREEYHLTAQNGNIHSQIMLLNGNVLTVNSDGEIPPLEPIIVNSSKPIRVAPFSIVFSHIPDAVLSACS* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0486 531 Gene3D Glycosidases 65 387 - -
Psa1g0486 531 Pfam Glycosyl hydrolase family 79, N-terminal domain 31 345 IPR005199 GO:0016020|GO:0016798
Psa1g0486 531 PANTHER HEPARANASE-RELATED 18 530 - -
Psa1g0486 531 PANTHER HEPARANASE-LIKE PROTEIN 3 18 530 - -
Psa1g0486 531 SUPERFAMILY (Trans)glycosidases 44 389 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0486 Psa-Chr1 29183948 29188541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0486 13 531 Glycoside Hydrolase AT5G61250 47.081 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0486 K07964 - gmx:100791916 847.425