Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0445 ATGGGGTGTGTGTTATCAAGTATTGATGAGGATGGAAGAGTTGGTATATGCAAGGAAAGGAAGAAGGTAATCAAACAGCTTGTGTGTAATAGAGAGGAATTTTCAGATTCCCTTTTAGCTTATTTGAAAGCACTGAGGAACACTGGCTCCACCCTCAGGCAGTTCACCGAGTCCGATACATTAGAATTGGACTTTGCATCTACTGGCCTGCCCGACCCCCCACCTTCCCCGCCGCCTAATTTGCTACCGCCACCGCTGCCTCCTTTTCTTGCTGACAAGAGTATGCTGCACATTGGCCAAGATGAAATACTAGAGAATGATGACATTGATCCAATTATGAACTCGCTATTGCTATTTCGACCTATGGATAAAATCGAAGTGGTGGAGTCATTCGAGGAGGAGAATTGGGAAGAAACCAAAACGGAATTCGAAGATGAAGTCCATGACTCGGAAGGTGATGCAAGTGTTAGAAGATTACGCAGTGGAAAGCAACAGGTTAGAGAACCAGTTGATGATAATGCATCTGCCATTTGTTTGTTTAAAAAAGAAACTCACGTTACGAAAGCTACGCCCAAGGGGGTTGGTAGAAGTGGCAAAACCTTGGAGGGTATAGTTAAAGAGTTAGATGATCATTTCCTGAAAGCATCAGCATGCATAAAGGAAATTGCTGTTCTCATTGATATCAGTAGCGGAGATACTCTTCTGCGGCAGAATTCTGGGCGTCATCATAGCAAGAGAACCGATTCTGCAAGGGTGTTTAGTGTACTGTCATGGAGTAGGTATACTAAGTCGCCCACATTCACCAAAGATGACGCCGACTTTTCTAGGCCTAGTGAACCATGCAGGCCTGGAGCTCATTGTGCCACGCTTAAAAAACTATATGCCGCAGAGAAGAAACTTTACAAAGCAGTAAAGGAGGAGGGAATAACCAAATTGGAGTTTGAGAGGAAGTCCTCGTCATTGCAAAAACAAGAGGATGAGAATCTTGACTTGGTCAAAATCGAAAAAATTCGATCAAATGTTAAGAAGTTGGAGTCTGATTTAATAAGCCTCCGGCAGTGCATCAGTGAAACATCATCATCAATTTTGGAACTTATAGACGAAGAGCTCTTACCACAATTGGTTGCATTAACTGCCGGGTTGTCACAAATGTGGAGGATAATGCATGAGTGCCATAAGTCTCAGGCTCTGATCTCTCAGCAGTTGTGTAACCTCAGTGATAACCATAACACAATTCTAAGTTCCGAACATCATCACCAGGCAACAATTCAGTTCGAGAGTGAGGCCTCTTATTGGTATAATAGCTTCTGCAAACTTGTAAAATCGCAACGAGAGTACGTGGGAACTCTCAGTAAATGGATTCAGCTTACGAATTGCCTCAGGGATGGTCCTGAAAACGGCGATCACTCTTCTATTCGCACAATCTGTGAACAATGGGAGCTTGGCCTTGATGGATTACCTGATAAGGAGGTCGCGGATGCGATAAAAAACCTTTTAATATCCATCCGTTCGATAATTGCTCAACAGGCCGAGGAAGATAACATTCTGAAAAAGTTGGAAAAACTTGAAAGAAAGTTGCAGAGGTGTTCGAAATCACTGGCTGTAATACAGAAAAAAATGGAATGGAACTTCGAAGAAGATGATGCCGATGTAGCTAATATAAGCCCGAAACATCCACTGTTTCAAAAAAAAGCTGAAACAGAAGCCTTGAAGAAGCAAGTGGAAAGTGTGAAAGCAGATTATTTGGATTCTGTTCAATGTAGTAGGACTATGACTCTAGATAACCTCAGAATTCGACTTCCTCATCTCTTCTTGGCACTAATGGAATTTTCAAGTGCTTCATCTCAAGCAATTGAGGCTATAAATTCTCAGTCAAGCCAATAG 1884 0.4246 MGCVLSSIDEDGRVGICKERKKVIKQLVCNREEFSDSLLAYLKALRNTGSTLRQFTESDTLELDFASTGLPDPPPSPPPNLLPPPLPPFLADKSMLHIGQDEILENDDIDPIMNSLLLFRPMDKIEVVESFEEENWEETKTEFEDEVHDSEGDASVRRLRSGKQQVREPVDDNASAICLFKKETHVTKATPKGVGRSGKTLEGIVKELDDHFLKASACIKEIAVLIDISSGDTLLRQNSGRHHSKRTDSARVFSVLSWSRYTKSPTFTKDDADFSRPSEPCRPGAHCATLKKLYAAEKKLYKAVKEEGITKLEFERKSSSLQKQEDENLDLVKIEKIRSNVKKLESDLISLRQCISETSSSILELIDEELLPQLVALTAGLSQMWRIMHECHKSQALISQQLCNLSDNHNTILSSEHHHQATIQFESEASYWYNSFCKLVKSQREYVGTLSKWIQLTNCLRDGPENGDHSSIRTICEQWELGLDGLPDKEVADAIKNLLISIRSIIAQQAEEDNILKKLEKLERKLQRCSKSLAVIQKKMEWNFEEDDADVANISPKHPLFQKKAETEALKKQVESVKADYLDSVQCSRTMTLDNLRIRLPHLFLALMEFSSASSQAIEAINSQSSQ* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0445 627 Coils Coil 505 539 - -
Psa1g0445 627 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Psa1g0445 627 PANTHER REDUCTASE SUBUNIT C, PUTATIVE (DUF630 AND DUF632)-RELATED 106 626 - -
Psa1g0445 627 PANTHER REDUCTASE SUBUNIT C, PUTATIVE (DUF630 AND DUF632)-RELATED 1 94 - -
Psa1g0445 627 Coils Coil 334 354 - -
Psa1g0445 627 Pfam Protein of unknown function (DUF632) 202 503 IPR006867 -
Psa1g0445 627 PANTHER UNCHARACTERIZED 106 626 - -
Psa1g0445 627 PANTHER UNCHARACTERIZED 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0445 Psa-Chr1 27192748 27197414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0445 1 59 Acyl Lipid Metabolism Gene Families AT2G27090 37.288 2.34e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0445 - - gmx:100809759 753.051