Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0442 ATGGAAGTACCGTCGGAGTCCGAAAAGAAAAAATCTTCAGAAGCTGTGAAAACCGCTTCAATTGGTTCGGTTTCTTCGAGAAAGAGAGTCGAGGCTCGGAACATAACGGATTCAGGTTCGGTTACAAAGAGATCAGGTTCGGGTCCAGTTAGTTCGAGTTCAGTACCGAGAAGAAACAGTACTGGAGGGTTAGCACAACGGTCTTCGCTATCGTTATCATCAGATGGAAGAACTAGAGCTACTATTAGAGATAAAACTGTTTCTTCTTCTTCAGCTTCAACTTCTTCGGTTACTGAACAAGTCCGAAGATCTCTCCCGGAGATTCGCCGGAGTTCGATTTCTGCTTTGCATGCTGGCAAGCCGGTTGCCGCCTCGCCTGTGGGTTCGAGTAAGACGGAAGTTGTTAAGAGGCCGTTAAGCAAGCCAGCATTGTCGGTTTCTGCTTTCTCCTCGTCGAGGAGAGTTGGTTCTTCGACTGGTGATGTTAGTGGCGGTGGTACCGGTGGTTCTGTTAGGAAGAGTGTGGCGAAGGTTTCATCACCGTCAATGTCAGCACGGTCGCCAACTGTGTCTGGCGGGTTGAGAGCGGGATCTTTGTCATCTTCTTCTGATAGAAGTTCTAGTTTGTCCGGAAGGAGGAAATTGGGGACTCCTGATAGCCGTAATTCACGGTTTATTATTCTTCCGCAGATTGAGGTTAAGGCTAATGATGATTTGAGATTGGATCTTAGGGGACACAGGGTTCGCAGTCTCACTTCTGGTGGATTAAACTTATCCTCAAATTTGGAGTTTGTCTATCTCCGTGACAATCTCTTGTCTACATTGGAAGGAGTGGAAATATTGACAAGAGTGAAGGTTCTTGATTTGAGTTTTAATGATTTTAAAGGGCCTGGATTTGAGCCTCTTGAGAGTTGCAAAGTACTGCAGCAACTCTATCTTGCTGGAAATCAAATCACATCATTGGCAAGTCTCCCGCAACTTCCCAATTTGGAGTTCCTCTCAGTAGCTCAAAATAAGTTGAAATCTCTCACTATGGCAAGTCAACCTCGACTCCAGGTGTTAGCTGCCAGCAAAAACAGAATTTCTACACTTACAGGTTTTCCATATTTACCAGTTCTTGAGCATTTGCGATTGGAGGAGAACCCTATATTGAAGATGCCTCATTTGGAAGCAGCCTCAATATTGCTTGTTGGGCCTACTTTAAAAAAATATAATGATAGAGATCTTTCTCGCGAAGAAATGGCAATAGCAAGAAGATACCCTGCACATACAGCTTTGTGCATTAGAGATGGTTGGGAGTTTGGTCGCCCTGAGCAAGCTGCAGAGTCAACTTTCCGCTTTCTAGTTGAGAAATGGAAGGATCATCTTCCACCTGGTTTTTTACTCAAAGAAGCCTCAATAGATAAACCTTTGGAAGAAGATGTGTGCCACAGTCACTTCACATTTGTTCATGATGGTGCAATGAGTACAGACCCTCCCTTAGTCTTAAAATATCAATGGTTTTGTGGTGATGTAACACTTTCGAATTTTGTCCCTATTCAAGAGGCCACTGATGAGTTTTACTTGCCAAAACACGATGAGATTGGAAAAATTCTGAAAGTGGAATGTATTCCCACTTTAGGAGAGACAGAATATCCTTCTATATTTGCCATCTCTTCTCGTGTTAAACCAGGGAGCGGAATTCCTAGGGTTATAAATCTTGAAGTCCATGGGGAACTGATAGAAGGAAGTATCATCCGGGGTTGTGCTAAGGTTGCATGGTGTGGTGGGACTCCAGGAAAAGGTGTTGCTAGTTGGCTGCGGAGAAAGTGGAACAGTAGTCCAGTGGTTATTGTTGGGGCAGAAGATGACGAGTATCAGCCCACCATTGATGACGTTGATTCAAGTTTAGTTTTCATGTACACACCAGTAACAGAAGAAGGTGCCAAAGGAGAACCTCAATATAAATATACAGATTTTGTAAGAGCTGCTCCCCCTTCAGTCAGTAATGTTAGAATAGTTGGAGATCCTGTTGAAGGAATCACCATTAAAGGAGTTGGTGATTATTTTGGTGGACGGGAGGGACCTAGCAAGTTTGAGTGGCTACGAAAGAACAGGGATACTGGAGATTTTCTGTTAGTGTCAGCTGGCACATCTGATTATACCTTGACCAAAGAAGATGTTGGTTATTGTCTGATGTTTATATACATACCGATTAATTTTGAAGGTCAGGAAGGAAAATCGTTGTCAGCGACGTCCTCTGTTGTAAAACAAGCTCCACCAAAAGTAACAAATGTCAAAATAATTGGTGATCTACGAGAGAATGGAAAAGTCACTGCGACTGGTATTGTAACTGGAGGAACCGAAGGATCTAGCAGAGTTCAATGGTACAAAACATATTTGTCAACTTTGGATGAAAGCAATCTTGAAGCATTAAGTACTTCTAAAATTGCTAAAGCATTTCGTATTCCTCTTGGAGCTGTTGGCTGTTACATTGTTGCAAAATATACACCAATGACTCCTGATGGTGATTCTGGGGAACCAACATTTGTAATATCTGATAGAGCAGTTGAGACACTTCCCCCAAGCTTAAATTTCTTATCAATCATTGGAGATTACTGCGAGGATGGAATATTGACAGCTTCATATGGATATGTTGGAGGTCATGAAGGAAAAAGTATATACAATTGGTATTTTCACGAGGTTGAAAGTGATTTTGGTTCTCAGATACCGGGAGTTTCTGGATTTCTGCAGTACCATATTACCAAAGAAGCTATTGGAAAATTCATCTCATTCCAGTGTACTCCTGTTCGGGATGATGGTGTTGTGGGTGACAAAAGAATTTGCATGAGCCAGGAGCGCATTCGCCCAGGAAGCCCAAGATTGCTTTCTTTACGCACAGTTGGAAATGCGGTTGAAGGAACAACACTAAGAATTGAAAAAACGTATTGGGGTGGTGAAGAGGGAGATTCAGTTTACCGCTGGCTTAGGACCAGTTCTGAGGGTGTCCAAAGTGAAATTATGGGAGCCACCACATCATCATATATGCTCTCAATTGATGATATTGGTTTCTTTATTTCTGTTTCTTGTGAGCCTGTCAGAAGTGATTGGGCCCGTGGACCCATTGTTCTCTCTGAACAGATTGGACCTATAATAGCTGGTCCACCAACTTGTCAAACTTTGGAAATTATTGGATCAATAATAGAAGGGCAGCGATTGAATTTCAATGCTGTGTATAACGGAGGGGAGAGGGGAGAATGCACCCACCAATGGTTTAGGGTAAAAGACAAAGGTCTACGAGAGAAGATAAGTACTCAAGAGTTTTTGGATTTGACTCTTGATGATGTTGGTGCCTGCATTGAGCTTGTCTTCACACCTGTGTGCAAAGATGGAACTAAAGGCAACCAAAAGAATGTGGTATCTGATATGATTTCTCCTGCGGATCCTAAGGGAATAGAGCTCTTAATTCCTGACTGTTGCGAAGACAGACAGGTTACCCCATTTAGGATATATTTTGGTGGACATGAAGGAGTTGGAGAATATATTTGGTACAGGACAAAGATTAAGCTTGAAGGATCTGCACTACTAAATATATCTAATGCTTCTGACATTGAGATATGCGGGACAGAGCTAACGTATAAACCAACTCTTAAAGATGTTGGATCTTTTTTGGCCTTGTATTGGGTGCCAACTCGCGTGGATAGCACTTGTGGAGAGCCTTTGGTTGCAATTTGCAACACCCCAGTTTCCCCTGCACCTCCGGTAGTTGCTAATGTACGTGTGAAAGAGTTATCTTTGGGAATTTACTCTGGCGAAGGTGAATATTTTGGTGGATATGAAGGAGAAAGTCTTCTTAGCTGGCACAGAAAAGATAGTGAGGGGACTGTTGAGCTGATTAATGGAGCAAGTTCTAGAACCTACAATGTTACTGATTCAGATTACACTTTTCGTTTGTTGTTTGGATATACTCCAGTTCGTTCAGATTCAGTTGTGGGTGAACTTAAGTTATCTGATCCAACTGACATTGTTTTCCCAGAGCTTCCATATGCAGAGATGCTTGCTCTGACCGGAAAGGCAGTTGAAGGTGACTTACTTACAGCTGTTGAAGTGATTCCAAATAGTGAGATGCAGCAACATGTCTGGAGCAAGTACAAGAAAGATATAAGATACCAATGGTTTTGTTCATCAGAAGTGGGAGACAGTTTTTCATATGAGCCATTACCCAATAAAAGTTCTTGCTCATATAGGGTGCGGTTTGAGGATATTGGCCGTTGTTTGAAATGTGAATGCGTTGTAACTGATGTGTTTGGACGGTCGAGTGAGGTGGTATACATTGAGACAACTTCTGTATTGCCAGGGATTCCTAGAATACACAAGCTGGAGATTGAGGGAAGGGGATTCCATACCAATCTTTATTCTGTTCGTGGCACTTATAGTGGTGGGAAGGAAGGCAAAAGCAGAGTCCAGTGGCTTAGATCAATGGTTGGAAGTCCCGATCTGATCTCTATACCAGGAGAAACAGGCAGAATGTATGAAGCAAACGTTGATGATGTCGGCTATAGGTTGGTGGCCATATACACTCCTATCAGAGAGGATGGAGTAGAGGGCCAATCAGTTTCTGTATCCACAGATCCAATTGCAGTTGAGCCCGATGTTCTTAAAGAAGTGAAGCAGAACCTTGATCTGGGATCAGTGAAATTTGAGGTATTGTGTGACAAAGACCAAACCTCGAAAAAGATTTCATCAGTGGGCACATATGAAAGACGAGTTCTTGAGATTAACAGGAAGAGGGTAAAGGTGGTAAAGCCTGCCACCAAGACTTCCTTTCCAACAACAGAAATCCGTGGTAGTTATGCCCCTCCCTTTCATGTGGAGCTTTTCAGGAATGATCCACACCGTCTAAAAATTGTAGTGGACAGTGAGAATGAGGCTCACTTGATGGTGCAGTCCCGACACATTCGGGATGTTATTGTTCTTGTGATTAGAGGACTTGCTCAACGATTCAACAGCACTTCCCTCAATTCTCTTCTCAAGATAGAGACATGA 5025 0.4277 MEVPSESEKKKSSEAVKTASIGSVSSRKRVEARNITDSGSVTKRSGSGPVSSSSVPRRNSTGGLAQRSSLSLSSDGRTRATIRDKTVSSSSASTSSVTEQVRRSLPEIRRSSISALHAGKPVAASPVGSSKTEVVKRPLSKPALSVSAFSSSRRVGSSTGDVSGGGTGGSVRKSVAKVSSPSMSARSPTVSGGLRAGSLSSSSDRSSSLSGRRKLGTPDSRNSRFIILPQIEVKANDDLRLDLRGHRVRSLTSGGLNLSSNLEFVYLRDNLLSTLEGVEILTRVKVLDLSFNDFKGPGFEPLESCKVLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLTMASQPRLQVLAASKNRISTLTGFPYLPVLEHLRLEENPILKMPHLEAASILLVGPTLKKYNDRDLSREEMAIARRYPAHTALCIRDGWEFGRPEQAAESTFRFLVEKWKDHLPPGFLLKEASIDKPLEEDVCHSHFTFVHDGAMSTDPPLVLKYQWFCGDVTLSNFVPIQEATDEFYLPKHDEIGKILKVECIPTLGETEYPSIFAISSRVKPGSGIPRVINLEVHGELIEGSIIRGCAKVAWCGGTPGKGVASWLRRKWNSSPVVIVGAEDDEYQPTIDDVDSSLVFMYTPVTEEGAKGEPQYKYTDFVRAAPPSVSNVRIVGDPVEGITIKGVGDYFGGREGPSKFEWLRKNRDTGDFLLVSAGTSDYTLTKEDVGYCLMFIYIPINFEGQEGKSLSATSSVVKQAPPKVTNVKIIGDLRENGKVTATGIVTGGTEGSSRVQWYKTYLSTLDESNLEALSTSKIAKAFRIPLGAVGCYIVAKYTPMTPDGDSGEPTFVISDRAVETLPPSLNFLSIIGDYCEDGILTASYGYVGGHEGKSIYNWYFHEVESDFGSQIPGVSGFLQYHITKEAIGKFISFQCTPVRDDGVVGDKRICMSQERIRPGSPRLLSLRTVGNAVEGTTLRIEKTYWGGEEGDSVYRWLRTSSEGVQSEIMGATTSSYMLSIDDIGFFISVSCEPVRSDWARGPIVLSEQIGPIIAGPPTCQTLEIIGSIIEGQRLNFNAVYNGGERGECTHQWFRVKDKGLREKISTQEFLDLTLDDVGACIELVFTPVCKDGTKGNQKNVVSDMISPADPKGIELLIPDCCEDRQVTPFRIYFGGHEGVGEYIWYRTKIKLEGSALLNISNASDIEICGTELTYKPTLKDVGSFLALYWVPTRVDSTCGEPLVAICNTPVSPAPPVVANVRVKELSLGIYSGEGEYFGGYEGESLLSWHRKDSEGTVELINGASSRTYNVTDSDYTFRLLFGYTPVRSDSVVGELKLSDPTDIVFPELPYAEMLALTGKAVEGDLLTAVEVIPNSEMQQHVWSKYKKDIRYQWFCSSEVGDSFSYEPLPNKSSCSYRVRFEDIGRCLKCECVVTDVFGRSSEVVYIETTSVLPGIPRIHKLEIEGRGFHTNLYSVRGTYSGGKEGKSRVQWLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPIREDGVEGQSVSVSTDPIAVEPDVLKEVKQNLDLGSVKFEVLCDKDQTSKKISSVGTYERRVLEINRKRVKVVKPATKTSFPTTEIRGSYAPPFHVELFRNDPHRLKIVVDSENEAHLMVQSRHIRDVIVLVIRGLAQRFNSTSLNSLLKIET* 1675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0442 1674 MobiDBLite consensus disorder prediction 1 217 - -
Psa1g0442 1674 MobiDBLite consensus disorder prediction 144 165 - -
Psa1g0442 1674 MobiDBLite consensus disorder prediction 1 15 - -
Psa1g0442 1674 ProSiteProfiles Leucine-rich repeat profile. 261 282 IPR001611 GO:0005515
Psa1g0442 1674 Gene3D Ribonuclease Inhibitor 321 417 IPR032675 -
Psa1g0442 1674 ProSiteProfiles Leucine-rich repeat profile. 307 328 IPR001611 GO:0005515
Psa1g0442 1674 PANTHER 187-KDA MICROTUBULE-ASSOCIATED PROTEIN AIR9 8 1674 - -
Psa1g0442 1674 SUPERFAMILY Outer arm dynein light chain 1 240 394 - -
Psa1g0442 1674 PANTHER EXPRESSED PROTEIN 8 1674 - -
Psa1g0442 1674 MobiDBLite consensus disorder prediction 16 102 - -
Psa1g0442 1674 MobiDBLite consensus disorder prediction 173 216 - -
Psa1g0442 1674 Gene3D - 1341 1436 - -
Psa1g0442 1674 Gene3D - 956 1033 - -
Psa1g0442 1674 Gene3D Ribonuclease Inhibitor 239 320 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0442 - - gmx:100807099 2631.28