Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0433 ATGGCGTCTTCTGATCCCAACAAGCTCTTAACCAAAGCTGATAAACTAACAAAACTCAATTTCTCTAGGTGGAGTGCTGATTGGAAGACTGCTACTGTTCTTTATGAACAAGCTGCTATTGGGTTTGTATCTGCCAAGAACCATGAGAAAGCCAAGTTGGCTTTTGAGAAAGCTTCGCAAGGACAAGAGATGCTTGCTTCACCTTGGAATGCAGCTGAACACATGGAATCTGCTGCTGCTCTGGCCAAGGAACTGAGTAATTGGAGAGAAGTTGAGGACTTCTGTCAAAAGGCATCTCAGTTGTACATGGAGTGTGGTAGACCACAACCTGCATCGGATGCTCTTGCAAAGGCAGCTCGTGCTTTAGAAGATACCATGCCTGAAGAAGCTATTCAGTTGTATACAGATGCTTGTACAATTCTGGAAGACGATAATAAGGAACAGATGGCCTTTGATCTATACCGTGCTGTAACTAGGGTTTATATAAAACTTGAGAAATATACAGATGCCGCATCTTCCCAGTTGAGATTGGGCTTGGCAGCTGACCAGTGTAATGCTACCAATAGTCAGTCCAAGGCTTATCTTAGTGCCATTATTGTCTACCTTTATGCTCACGACTTTCAGCAAGCAGAGAAGTGCTATAATGACTGCTCTCAGATTGAAGCTTTTCTCAAAAGTGACCACAACCGTTGCGCTAGCAAGTTTCTTGCTGCTTACTCTGATGGAGACGTCGACGAAATCAAAAAAATTGCTCAGTCTAGCGCTGTTTCCCATCTTGACCATGCAATCATTCGGCTCGCAAGGAAACTTCCAACTGGTGATGTGAGTGCATTAAAGGCCGTCACTGTCGAAGATGACGAGGAACCACTGGACGAAAATGACCTGACTTAA 891 0.4422 MASSDPNKLLTKADKLTKLNFSRWSADWKTATVLYEQAAIGFVSAKNHEKAKLAFEKASQGQEMLASPWNAAEHMESAAALAKELSNWREVEDFCQKASQLYMECGRPQPASDALAKAARALEDTMPEEAIQLYTDACTILEDDNKEQMAFDLYRAVTRVYIKLEKYTDAASSQLRLGLAADQCNATNSQSKAYLSAIIVYLYAHDFQQAEKCYNDCSQIEAFLKSDHNRCASKFLAAYSDGDVDEIKKIAQSSAVSHLDHAIIRLARKLPTGDVSALKAVTVEDDEEPLDENDLT* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0433 296 Pfam Soluble NSF attachment protein, SNAP 5 260 - -
Psa1g0433 296 Gene3D Tetratricopeptide repeat domain 3 272 IPR011990 GO:0005515
Psa1g0433 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 2 281 - -
Psa1g0433 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 2 281 IPR000744 GO:0006886
Psa1g0433 296 SUPERFAMILY TPR-like 7 250 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0433 K21198 - gmx:100790986 442.58