Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0393 ATGGATAACAAGACATCATCATCGGCAAAACCAAAAACTGTTGATTTGGATGCACCTCTTCATAACCTAGGATTTGAGTTTGAAGAAATCTCAGCAGGGAAAGTTTCTGGAAATCTTCATCTTACCCAAAAGTGTTGTCAGCCATTTAAGGTGCTTCATGGAGGGGTATCAGCATTGATAGCAGAATCACTATCAAGTATTGGAGCACATATAGCTTGTGGATATAAAAGGGTTGCAGGGATTCAACTTAGCATCAATCATTTGAAATCGGCTGTGATTGGTGATTTTATTCATGCTGAAGCAACACCTTTGACGGTTGGGAAATCCATTCAGGTGTGGGATGTGAAAATCTGGAAGGTTGATCCTTCAAACTCACAAAACAGATTGTTGATAGCATCTTCTAGAGTTACTCTTAAAAGCAACATGCCCGTCCCAGACAATGCAAAACACGCCGGCGACTTGCTAAAGAAGCATGCAAAACTGTAA 486 0.4053 MDNKTSSSAKPKTVDLDAPLHNLGFEFEEISAGKVSGNLHLTQKCCQPFKVLHGGVSALIAESLSSIGAHIACGYKRVAGIQLSINHLKSAVIGDFIHAEATPLTVGKSIQVWDVKIWKVDPSNSQNRLLIASSRVTLKSNMPVPDNAKHAGDLLKKHAKL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0393 161 Gene3D Hotdog Thioesterase 4 141 - -
Psa1g0393 161 TIGRFAM unchar_dom_1: uncharacterized domain 1 21 138 IPR003736 -
Psa1g0393 161 CDD PaaI_thioesterase 23 139 - -
Psa1g0393 161 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 17 138 IPR029069 -
Psa1g0393 161 Pfam Thioesterase superfamily 50 122 IPR006683 -
Psa1g0393 161 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 4 161 - -
Psa1g0393 161 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 4 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0393 Psa-Chr1 24608447 24610624 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0393 K19222 - gmx:100527631 230.335