Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0382 ATGTTAGCTTCTTCGCTCTCATTCCTTCATTCTTGCACATTTCCCTCTTCTTCTTCCTCTTCGTTGTTCACAATTCCATCTCCGAATCCCAATTCTCCGTCTTCATTATCCTTTGTGGTTGAAGCCAAATCAACTACCCGAAGGGAAGACAGAACTGCTCGTCATGTTCGTATCAGGAAGAAGGTTGATGGAACAACCGAAAGACCAAGATTGTCTGTCTTCCGATCCAACAAGCATCTCTTTGTCCAGGTAATTGATGACACCAAGATGCATACACTTGCTTCAGCTTCCACAATGCAGAAGACAATTGCGGAAGAGTTCAACTACACTTCTGGCCCTACAATTGAAGTAGCAAAGAGGGTGGGTGAGATCATTGCAAAATCCTGTCTGGAGAAGGGAATCACAAAAGTAGCCTTTGACCGTGGTGGTTACCCGTACCATGGCCGTGTTAAAGCTATCGCTGATGCGGCTCGCGAACATGGCCTGGAGTTCTAA 495 0.4586 MLASSLSFLHSCTFPSSSSSSLFTIPSPNPNSPSSLSFVVEAKSTTRREDRTARHVRIRKKVDGTTERPRLSVFRSNKHLFVQVIDDTKMHTLASASTMQKTIAEEFNYTSGPTIEVAKRVGEIIAKSCLEKGITKVAFDRGGYPYHGRVKAIADAAREHGLEF* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0382 164 CDD Ribosomal_L18_L5e 58 162 - -
Psa1g0382 164 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 46 164 IPR005484 GO:0003735|GO:0005840|GO:0006412
Psa1g0382 164 Hamap 50S ribosomal protein L18 [rplR]. 46 164 IPR004389 GO:0003735|GO:0005840|GO:0006412
Psa1g0382 164 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 25 164 - -
Psa1g0382 164 SUPERFAMILY Translational machinery components 47 162 - -
Psa1g0382 164 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 25 164 IPR005484 GO:0003735|GO:0005840|GO:0006412
Psa1g0382 164 TIGRFAM L18_bact: ribosomal protein uL18 48 164 IPR004389 GO:0003735|GO:0005840|GO:0006412
Psa1g0382 164 Gene3D - 45 164 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0382 K02881 - gmx:100306308 239.195