Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0200 ATGTTCGGAGCTGTTTCATCTTCAACACCACTAGGTTTTGGAAGGATTTGCGCTGTAAATGCTGAATACATTGAGGAGCCAGCGACAAATGTGAAATTTCCGACATCTTTGAGTTTCCCGGGTTGCACAGACTCATTAACCTTATTTGGAACTGGATACAGAGAAAAAGTTTTCGCGATTATCGGCGTCAAGGTCTACGCAGCAGGACTGTATCTAAATCAGTCTATCGTAAGTGATTTGAACGCTTGGAAAGGAAAATCGACAGACGCGATTCAAGAGAATTCTTCCTTGTTCAACACCATTTTCCAATCTCCGCTTGAGAAATCATTGCAAATCATTCTTGTGAGAAATGTTGATGGTAAAACTTTCTGGGATGCGTTAAGTGATGCCATATCACCAAGAATTGCAAAACCAACAACTGCAGATGAAACTGCATTGACCACTTTCCGTAGCGTCTTTCAAGATCGATCCCTTAAAAAAGGAACTTTCATTTTCTTGACTTGGTTGAACCCCTCCAAATTGCTTGTTTCTGTCTCGTCGGACGGAATTCCATCTACCGTTGATGCTACAATTGAATCTGCAAATGTGACTCATGCTCTCTTTGATGTATTCCTCGGAGACAGTCCTGTTTCTCCCTCCTTGAAATCTTCAGTGGCTGAAAGCTTGTCTAAAGTACTCGAGTAA 684 0.4167 MFGAVSSSTPLGFGRICAVNAEYIEEPATNVKFPTSLSFPGCTDSLTLFGTGYREKVFAIIGVKVYAAGLYLNQSIVSDLNAWKGKSTDAIQENSSLFNTIFQSPLEKSLQIILVRNVDGKTFWDALSDAISPRIAKPTTADETALTTFRSVFQDRSLKKGTFIFLTWLNPSKLLVSVSSDGIPSTVDATIESANVTHALFDVFLGDSPVSPSLKSSVAESLSKVLE* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0200 227 Gene3D - 76 222 IPR016089 -
Psa1g0200 227 Pfam Chalcone-flavanone isomerase 30 224 IPR016087 GO:0016872
Psa1g0200 227 Gene3D - 33 204 IPR016088 -
Psa1g0200 227 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 19 226 - -
Psa1g0200 227 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 19 226 - -
Psa1g0200 227 SUPERFAMILY Chalcone isomerase 23 226 IPR036298 GO:0016872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0200 Psa-Chr1 11536357 11538662 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0200 - - gmx:732649 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0200 1 11536357 11538662 Psa1g0200 1 11536357 11538662 ECH