Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0181 ATGCAAACATCAATCGCATTCTCTCCATTTCCAAACGCACTCATCAAATTCAGAACACAACCTTCCAAACCAAACCCTATTTCTCACCGAACCAAACCATCTTTTCCCATTACACTATGCAATTTTCAACCTCAATCACCCTCAACCCCCTCCACATTGAAATCCCCCTTAACCCGCGTCTCCAACGCGGGTCCTCTTCGTTGCGGCATTTCGTCGAACAGCGAGAACGCAAATGTGGGTGAGAGGAGTTTAAGGCAGTGGGTCGAGCTTACTGGTGAGGTGATATCGACGGCGTTTCCTTTGTGGGTTACCATTGGGTGTGTATTGGGTTTGGTGAGACCGAGTTCATTCACTTGGGTTACTCCTAAATTGAGCATTGTGGGTCTTAGTGTAATTATGCTTGGTATGGGTATGACTTTAACTCTTGATGATCTTCGCTCTGCTCTTTCTATGCCTAAAGAAGTCTTCTCTGGTTTTTTCCTTCAATATTCGGTGATGCCATTATCTGCGTTTTTTATAAGCAAACTCTTAAATCTTCCCTCACATTATGCAGCTGGTTTAATATTAGTTGGGTGCTGTCCAGGAGGCACAGCTAGTAATATTGTTACATATCTTGCACGTGGAAATGTGGCGCTTTCCGTTGTAATGACAGCTGCAAGCACTCTATCAGCCGTGATCATGACTCCTTTTCTGACAGCCAAACTAGCTGGTAAATATGTAGCTGTGGATGCAGCTGGCTTATTAATGTCGACATTGCAGGTCGTGCTTTTTCCTGTATTAGCTGGTGCGCTTCTGAATCAGTATTTCCAACCTCTTGTTAAACTTGTATCTCCATTGATGCCACCCTTGGCCGTTGCAACTGTGGCAATTTTATGTGGAAATGCAATTTCACAGAGTTCTTCTGCAATCCTTATGTCTGGAAGACAGGTAATCTTAGCCGTCTGCCTTCTTCATGCTTCTGGTTTTTTCTTCGGGTACGTTCTTGCAAGGATTCTCGGGCTAGATATGCCATCATCGCGAACCATATCCATTGAAGTTGGCATGCAGAACTCGGTTCTCGGTGTAGTGCTGGCTGCCAAGCACTTTGGAGACCCCCTAACAACGGTACCTTGTGCTGTTTCAAGTGTGTGTCACTCAATCTTTGGTAGCATCTTGGCAGGAATGTGGAGACGTTCTGTGCCTCCTGAGATAAAGGACTGA 1200 0.4517 MQTSIAFSPFPNALIKFRTQPSKPNPISHRTKPSFPITLCNFQPQSPSTPSTLKSPLTRVSNAGPLRCGISSNSENANVGERSLRQWVELTGEVISTAFPLWVTIGCVLGLVRPSSFTWVTPKLSIVGLSVIMLGMGMTLTLDDLRSALSMPKEVFSGFFLQYSVMPLSAFFISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPFLTAKLAGKYVAVDAAGLLMSTLQVVLFPVLAGALLNQYFQPLVKLVSPLMPPLAVATVAILCGNAISQSSSAILMSGRQVILAVCLLHASGFFFGYVLARILGLDMPSSRTISIEVGMQNSVLGVVLAAKHFGDPLTTVPCAVSSVCHSIFGSILAGMWRRSVPPEIKD* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0181 399 Pfam Sodium Bile acid symporter family 127 301 IPR002657 GO:0016020
Psa1g0181 399 Gene3D - 84 392 IPR038770 -
Psa1g0181 399 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 67 399 - -
Psa1g0181 399 PANTHER SODIUM-BILE ACID COTRANSPORTER 67 399 IPR004710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0181 Psa-Chr1 10769139 10771863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0181 67 399 Organic Solute Cotransporters AT1G78560 76.276 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0181 K03453 - egr:104450062 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0181 1 10769139 10771863 Psa1g0181 1 10769139 10771863 ECH