Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0179 ATGTTCTCTGGGTTACCATATATTTACTCGTTAATGAACTGCTTAATCTGCTTATGGTATGGAACTCCTTTGATTTCACATGATAATATTTTGGTTACAACTGTTAATTCAATTGGAGCGGTGTTCCAATTTGTGTACATAATCCTCTTCATGATGTGTGCTGAGAAAGAAAAGAAGATGAAAATGCTTGCATGGTTGATGGTTGTTCTTGGCGTCTTTGCAATCATATTGATTGGAAGTTTGCAAATCGATGATGTTATAATGCGCCGGTTCTTTGTTGGGGTTTTGAGTTGTGCATCTCTGATTTCGATGTTTGCGTCTCCGTTGTTTATAATTAAATTGGTTATTCAGACAAAGAGTGTTGAATTCATGCCGTTTCATATCTCACTTTGCACCTTCCTAATGAGCACTTCTTTCTTAGTTTACGGATTACTCAGCGATGATATCTTCATTTATGTGCCAAATGGGATAGGAACCATTTTGGGAACGACACAGTTGATATTATACTTCCACTTTGAGAGTAAATCGAGGATAGACGCCGAAGAACCGTTGATCGTGTCATATGCATGA 570 0.3754 MFSGLPYIYSLMNCLICLWYGTPLISHDNILVTTVNSIGAVFQFVYIILFMMCAEKEKKMKMLAWLMVVLGVFAIILIGSLQIDDVIMRRFFVGVLSCASLISMFASPLFIIKLVIQTKSVEFMPFHISLCTFLMSTSFLVYGLLSDDIFIYVPNGIGTILGTTQLILYFHFESKSRIDAEEPLIVSYA* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0179 189 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 1 189 - -
Psa1g0179 189 Pfam Sugar efflux transporter for intercellular exchange 92 176 IPR004316 GO:0016021
Psa1g0179 189 Pfam Sugar efflux transporter for intercellular exchange 2 57 IPR004316 GO:0016021
Psa1g0179 189 Gene3D - 1 60 - -
Psa1g0179 189 Gene3D - 91 177 - -
Psa1g0179 189 PANTHER RAG1-ACTIVATING PROTEIN 1 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0179 Psa-Chr1 10751814 10752960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0179 2 188 Miscellaneous Gene Families AT3G14770 64.894 2.89e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0179 K15382 - gmx:100305842 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0179 1 10751814 10752960 Psa1g0179 1 10751814 10752960 ECH