Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1773 ATGGGGAAGAAGACGAAGAAGCCAGGGAAAGGCAAGGAGAAAACAGAGAGAAAAACTGCGAAAGCAGAGGAGAAGAGAGCTCGCAGGGAGACCAAGAAGCTTTCCCCGGAGGACGATATCGATGCCATATTGTTAAATATACAGAAGGAAGAAGCCAAAAAGAAGGAAGTTCAGATTGAAGACAATGTTCCTGCACCTTCTCCTCGATCCAACTGTACGCTCACAGTTAATCCCTTGAAAGAGACAGAGTTGATTCTTTATGGTGGCGAGTTTTACAACGGTAACAAGACCTTTGTCTATGGTGATCTTTACCGATATGATGTGGAGAAGCTGGAATGGAAACTAATTTCAAGTCCTAATAGTCCTCCCCCTCGCAGTGCTCATCAGGCAGTTGCATGGAAGAATTATCTTTATATTTTTGGCGGTGAATTCACATCTCCAAACCAAGAACGATTTCATCATTACAAGGACTTTTGGATGTTGGACTTGAAAACAAATCAATGGGAACAACTTAATTTGAAAGGTTGCCCAAGTCCACGCTCTGGACATCGAATGGTATTGTACAAGCACAAGGTTATTGTTTTTGGCGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTCGATCAATTTAAGTGGCAAGAAATAAAACCTAAGCCTGGTGCAATGTGGCCAAGTGGGCGGAGTGGTTTTCAATTATTTGCTTACCAAGATGAGATTTTTTTGTACGGGGGCTATTCAAAAGAAGTTTCATCTGATAAGAGTATCTCCGAAAAAGGCATTGTTCATTCAGACATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAATAAGGTCAAGAAAAGTGGAATGCCTCCAGGGCCTCGTGCTGGGTTTTCCATGTGTGTCCATAAGAGGAGGGCTGTGCTCTTTGGAGGTGTTGTGGATATGGAAGTTGAAGGTGATAAAATGATGAGCCTGTTCTTAAATGAGCTTTATGGCTTTCAATTAGATAACAATCGCTGGTATCCACTGGAGTTAAGAAAGGAGAAGTCAACGAAAGATAAGTTAAAAAAGAATGAACGGAAGTCTATAGATGGTGTTGATGACAAAACCAATCCACAATTGGAAGCAAGAGAAGAAAATGAGGGTTCGGAATGCCAAGAAGAAGCAAGCAATGCGGGAGTCAACATTGATAATGTATCCCAGAATATTAAATCAAATATGAGTATTGTTGATAGTGCAACAGTTGAATCTGCAAGAAACCTGCAGGAATCTGGTGTTAACTTGGACATTCAAAGTTCTTTGCCTGAGGTCGTGAAGCCTTGTGGACGTATTAATTCCTGCATGGTTGTTGGGAGAGATACATTATACGTATATGGTGGGACTATGGAGATTAAGGATCGAGAAATCACTCTTGATGACTTGTATACTCTGAATCTTAGCAAACTTGATGAGTGGAAGTGCATTAAACCGTCATCAGAATCTGAATGGATGGAGGTTTCAGATGATGATAATGAAGATGATGAAGATGATGAAGAAGACGGTGAAGATGAATCTGATGGCGATACCCTAAGTGATGATGATGAGGACAAGGAGGAGAATGAATCAGCTAAAGTGGGAGATGCTGTTGCTTTGATTAAAGGTGGGGTGAAAAATCTGCGGAGAAAAGAAAGAAGGTCACGAATAGAGCAGATCAGAGCAAGCCTTGGCTTGTCAGATTCGCAAAGAACACCAATGCCAGGAGAATCCTTGAGGGATTTCTATAGACGCACAAATTTGTATTGGCAAATGGCTGCTCATGAGCATACTCAACACACTGGAAAGAATTTCTAG 1839 0.4144 MGKKTKKPGKGKEKTERKTAKAEEKRARRETKKLSPEDDIDAILLNIQKEEAKKKEVQIEDNVPAPSPRSNCTLTVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKVIVFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPSGRSGFQLFAYQDEIFLYGGYSKEVSSDKSISEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRAVLFGGVVDMEVEGDKMMSLFLNELYGFQLDNNRWYPLELRKEKSTKDKLKKNERKSIDGVDDKTNPQLEAREENEGSECQEEASNAGVNIDNVSQNIKSNMSIVDSATVESARNLQESGVNLDIQSSLPEVVKPCGRINSCMVVGRDTLYVYGGTMEIKDREITLDDLYTLNLSKLDEWKCIKPSSESEWMEVSDDDNEDDEDDEEDGEDESDGDTLSDDDEDKEENESAKVGDAVALIKGGVKNLRRKERRSRIEQIRASLGLSDSQRTPMPGESLRDFYRRTNLYWQMAAHEHTQHTGKNF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1773 612 MobiDBLite consensus disorder prediction 354 387 - -
Prci9g1773 612 MobiDBLite consensus disorder prediction 500 536 - -
Prci9g1773 612 MobiDBLite consensus disorder prediction 354 394 - -
Prci9g1773 612 Pfam Galactose oxidase, central domain 135 187 - -
Prci9g1773 612 Pfam Galactose oxidase, central domain 246 305 - -
Prci9g1773 612 MobiDBLite consensus disorder prediction 496 544 - -
Prci9g1773 612 MobiDBLite consensus disorder prediction 12 35 - -
Prci9g1773 612 SUPERFAMILY Kelch motif 82 490 IPR015915 GO:0005515
Prci9g1773 612 Coils Coil 12 32 - -
Prci9g1773 612 Coils Coil 40 60 - -
Prci9g1773 612 Pfam Domain of unknown function (DUF4110) 572 610 IPR025183 -
Prci9g1773 612 Gene3D - 42 366 IPR015915 GO:0005515
Prci9g1773 612 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 611 - -
Prci9g1773 612 Pfam Galactose oxidase, central domain 446 494 - -
Prci9g1773 612 Pfam Galactose oxidase, central domain 68 122 - -
Prci9g1773 612 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1773 Prci-Chr9 29661507 29671400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1773 166 343 Acyl Lipid Metabolism Gene Families AT3G05420 27.513 1.74e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1773 - - gmx:100818228 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1773 9 29661507 29671400 Prci9g1773 9 29661507 29671400 ECH