Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1766 ATGCCCGAACCACTGGAACCCCGGGGTAATGTTTTGCTTCCAAAATCAGAGTTGGGCGCAGCAGAGAGCTCGAAGGTTCTCCAGCATCCGAAGCTCGTCGTTTTGGCTGACCTCAACGTCGACCCCCCCGAAGCAGAGGAGGATGATTCCCCCCACGTGCCTCCGCCAGAAATTACCATGTTAACAAATGGAAAAGGTCAAGAGAAGAGTATGTTGTCCAAAGGCACTGATAGTGCTGATGGTGAAGGTAAAAAGTTGCACAAACTGGGGAAGTGCCGCTCCAGATTTAGTAAGACAGATTCTTCTGTTGATTGCGGAGCCGATGGAGATGGTGATCAGCATGTCCAAGGGGTTCCTTCCTCTCGAGAGGAAAAAGTTAGCAGTTTGAAGACTGGCTTGGCTCATGTTGCAAGGAAGATGCCCAAAAATGCACATGCTCATTTTATACTTGGCCTAATGTACCAAAGGTTGGGCCAACCTCAAAAGGCTCTATCGGCATATGAGAAGGCTGCAGAGATCTTACTTCGGTCTGAGGCTGAGATTAGTCGGCCAGAGTTGCTTTCTTTAGTTCAAATTCACCATGCACAGTGCCTGGTACTAGAAAGTGCAGTAGAAAATAGTTCAGATAAAGAACTTGAACCTCATGAACTCGAGGAAATTCTCTCCAAACTAAAGGAGTCTGTGCAATCAGATATCAGGCAGGCAGCTGTATGGAATACTCTAGGATATGTGCTTCTTAAAACTGGTCGTTTGCAGAGTGCGATCACAGTACTGTCATCATTGTTGGCTATTGCACCAGACAACTATGATTGCCTGGGAAATCTTGGGATTTCATATCTTCAAAGTGGGAATTTGGAATTATCCGCAAAATGCTTCCAAGAGTTGATTCTAAAAGATCAGAATCATCCTGCAGCTTTGATCAACTATGCTGCCCTTCTTTTATGTAAATATTCTTCAGTTGTAGCAGGTGCTGGCGCAAGTGCTCCAGAAGGTGCTTCTTTAGACCAGGTTGCAGCTGCTAGTGTTGCGAAGGAATGTTTGCTAGCTGCAGTAAAAGCAGATCCCAAATCAGGACATATCTGGACAAATCTTGCCAATGCATTTTCTCTGTGTGGTGATCATAGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAGACTGGAGCCTAATTGCATGTCTACTAGATACGCTGTTGCCATCCATAGAGTAAAGGATGCTGAAAGATCTCTAGATCGGGAGCAGCTTTCATGGGCTGGAAATGAGATGGCTTCTATAATAAGAGATGGTGATTCATCCTTCGTTGAGCTTCCTGTAGCATGGGCTGGACTTTCCATGGTTCACAAGGCCCAGCATGAAATAGCAGCCGCTTTTGAAACTGAACAGCATGACCTGATGGAAGTTGAAGAGCGTGCTGTTCGCATTTTAAAACAGGCTGTAGCAGAAGATCCAGATGATGCTGTGCAGTGGCACCAACTTGGTCTTCATAGTCTCTGTACTCGGCAATTCACAACATCTCAAAGGTATCTCAAAGCTGCTGTTGCCCGTGACAAGCACTGTAGCTATGCATGGTCAAATCTAGGTGTTTCACTTCAACTATCAGAAGAACCATCAAAAGCTGAACAAGTGTATAAGCAGGCCTTGGCACTGGCGACAACACAACAAGCGCATGCTATACTATGCAATCTGGGGAATCTCTATCGTCAGCAGAAAAAGTATGAACGTGCCAAGGCAATGTTGACAAAGTCCCTTGAACTACAACCTGGCTACGCTCCTGCATATAACAATCTGGGTCTTGTTTTTGTTGCAGAGGGTCTGTTGGAAGAGGCCAAGTATTGTTTTGACAAGGCCCTCCAATCAGATCCATTACTGGATGCAGCGAAGTCTAACGGGATTAAGGCGGTTGCCATGTCAAAGTTATGCAGAGGCCTCTCCTCATGCATTCTTAAAGAATGA 1953 0.4578 MPEPLEPRGNVLLPKSELGAAESSKVLQHPKLVVLADLNVDPPEAEEDDSPHVPPPEITMLTNGKGQEKSMLSKGTDSADGEGKKLHKLGKCRSRFSKTDSSVDCGADGDGDQHVQGVPSSREEKVSSLKTGLAHVARKMPKNAHAHFILGLMYQRLGQPQKALSAYEKAAEILLRSEAEISRPELLSLVQIHHAQCLVLESAVENSSDKELEPHELEEILSKLKESVQSDIRQAAVWNTLGYVLLKTGRLQSAITVLSSLLAIAPDNYDCLGNLGISYLQSGNLELSAKCFQELILKDQNHPAALINYAALLLCKYSSVVAGAGASAPEGASLDQVAAASVAKECLLAAVKADPKSGHIWTNLANAFSLCGDHRSSSKCLEKAARLEPNCMSTRYAVAIHRVKDAERSLDREQLSWAGNEMASIIRDGDSSFVELPVAWAGLSMVHKAQHEIAAAFETEQHDLMEVEERAVRILKQAVAEDPDDAVQWHQLGLHSLCTRQFTTSQRYLKAAVARDKHCSYAWSNLGVSLQLSEEPSKAEQVYKQALALATTQQAHAILCNLGNLYRQQKKYERAKAMLTKSLELQPGYAPAYNNLGLVFVAEGLLEEAKYCFDKALQSDPLLDAAKSNGIKAVAMSKLCRGLSSCILKE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1766 650 Gene3D Tetratricopeptide repeat domain 469 557 IPR011990 GO:0005515
Prci9g1766 650 Pfam Tetratricopeptide repeat 144 173 IPR013105 -
Prci9g1766 650 ProSiteProfiles TPR repeat profile. 590 623 IPR019734 GO:0005515
Prci9g1766 650 ProSiteProfiles TPR repeat profile. 144 177 IPR019734 GO:0005515
Prci9g1766 650 MobiDBLite consensus disorder prediction 100 125 - -
Prci9g1766 650 SUPERFAMILY TPR-like 137 427 IPR011990 GO:0005515
Prci9g1766 650 Pfam Tetratricopeptide repeat 359 391 IPR019734 GO:0005515
Prci9g1766 650 Pfam Tetratricopeptide repeat 590 621 IPR019734 GO:0005515
Prci9g1766 650 Pfam Tetratricopeptide repeat 522 586 - -
Prci9g1766 650 SMART tpr_5 590 623 IPR019734 GO:0005515
Prci9g1766 650 SMART tpr_5 556 589 IPR019734 GO:0005515
Prci9g1766 650 SMART tpr_5 235 268 IPR019734 GO:0005515
Prci9g1766 650 SMART tpr_5 486 519 IPR019734 GO:0005515
Prci9g1766 650 SMART tpr_5 269 302 IPR019734 GO:0005515
Prci9g1766 650 SMART tpr_5 358 391 IPR019734 GO:0005515
Prci9g1766 650 SMART tpr_5 520 553 IPR019734 GO:0005515
Prci9g1766 650 SMART tpr_5 144 177 IPR019734 GO:0005515
Prci9g1766 650 ProSiteProfiles TPR repeat profile. 235 268 IPR019734 GO:0005515
Prci9g1766 650 MobiDBLite consensus disorder prediction 39 85 - -
Prci9g1766 650 SUPERFAMILY TPR-like 350 621 IPR011990 GO:0005515
Prci9g1766 650 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 27 646 - -
Prci9g1766 650 ProSiteProfiles TPR repeat profile. 556 589 IPR019734 GO:0005515
Prci9g1766 650 Gene3D Tetratricopeptide repeat domain 128 190 IPR011990 GO:0005515
Prci9g1766 650 ProSiteProfiles TPR repeat region circular profile. 590 621 - -
Prci9g1766 650 Gene3D Tetratricopeptide repeat domain 191 467 IPR011990 GO:0005515
Prci9g1766 650 Gene3D Tetratricopeptide repeat domain 558 621 IPR011990 GO:0005515
Prci9g1766 650 Pfam Tetratricopeptide repeat 245 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1766 Prci-Chr9 29628723 29637535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1766 471 622 Glycosyltransferase AT3G04240 27.451 2.14e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1766 - - qsa:O6P43_030786 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1766 9 29628723 29637535 Prci9g1766 9 29628723 29637535 ECH