Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1725 ATGGCCCCTATCATCCGCAAGAACAATGCCCTGCCAAAAACGGGCCTCTTCCAAGAAAGTTTATCATCCTCCATTAAGCTCGAAGCATACACCTTCCTCGCCAATGGCCACCCGATTCTCACCCAAGTCCCGCCAAACATCACAGCAACCTCGGCCAACAACGTCAGCCCCGTCGGTTGCTTCGTCGGCTTTGACTCCGACCGTCCCAGTAGCTGCCACGTGGTTCCCCTCGGAAAGCTCAGTGGGATCAAGTTCATGAGCATTTTCAGATTCAAGGTATGGTGGAGCACCCACTGGGCCGGAAGTAAAGGAAGCGACTTGGAGAACGAAACCCAAGTGATGATGCTGGAGAATTGCGATCTCTTGCGTCGTCCATACGTCCTTCTTCTTCCCCTCATCGAAGGGCCTTTCAGAGCTTCTCTTCAACCTGGTCTCCACGATTACGTCGACATTTGCTTGGAGAGTGGCTCCACGAGCGTCTCTGGTTCTACCTTCAGAAGCTGTTTGTACATCCACGCGGGAGACGATCCTTATAACTTGATGAAGGAAGCCATGAAAGTGATAAGAGACCATCTGGGGACGTTCAAGCTTCTTGAAGAGAAAACCCCTCCGGGAGTAGTGGACAAGTTTGGATGGTGTACTTGGGACGCGTTTTATCTCAAGGTGAATCCAGAAGGAGTTCGGGAAGGCGTGAAAGGCCTCGCGGAGGGGGGGTGCCCTCCAGGTTTCGTCATAATCGACGACGGCTGGCAAAGCTTCTGTCACGACGGAGACGAAACCGTCGGCGATAGTGGAAGCTTGAACTGTTCAATACCCGGAGAGCAAATGCTCAACAGGCTTACAAGTTTCGAAGAGAACAGCAAGTTTAAGGATTACTATAGCCGGAGGAGTCCTTCGGATAGAGGGCTGGGTGCCCTTTCGAGGGACCTGAAGGAGGAGTTCAAGAGCTTAGAGCATGTGTACGTGTGGCATGCGTTTTGTGGGTATTGGGGTGGGCTTAGGCCCAAAGTTCCGGGCCTGCCTGAGGCGAAGGTGGTTGTTCCCAAGTTGTCGGAGGGTGCGGCGAAGACCATGACGGATCAGGCGGTGGTGAAGATACTGGAAGTCGGCGTAGGATTGGTGGCACCGGAAGAGGCTCACAAGTTGTACGACGGACTCCATTCTCACCTGCAATCTGCGGGTATTGACGGCGTCAAGATTGATGTCACCCAAATTCTGGAGATGCTATCAGAGGAATATGGGGGTCGTGTTGAACTCTCCAAAGCTTACTACAAAGCCCTCACCGACTCAGTGAAGAAGCACTTCAAAGGCAACGGCGTCATCTCTAGCATGCAGCAATGCAACGATTTCATGTTCCTTGGCACACAAACCATTTCTCTCGGCCGAGTTGGTGATGATTTTTGGAGCATCGACCCTGCGGGAGATCCGAACGGTACGTATTGGCTTCAAGGATGTCATATGGTGCACTGTGCCTATAACAGCTTGTGGATGGGAAATTTCTTTCACCCTGATTGGGACATGTTCCAGTCCGATCACCCCTGTGCTGAATTCCACGCTGCTTCACGGGCCATCTCCGGTGGCCCTGTTTATGTCAGTGACTCTGTTGGCAACCATAACTTCAAACTCCTCAACAAGCTCGTCCTCCCTGATGGCTCCATCCTCAGGTGCCAACACTACGCCCTCCCCACCAGAGACTCCTTGTTTCAAGACCCTCTTCATGATGCCAAATCCATGCTCAAAATCTGGAACCTCAACAAATATACGGGGGTTTTGGGGGTGTTTAATTGCCAAGGAGGAGGATGGTGCCGTGTTACGAGGAGAAACAGAAGCGCCAGTGAGTGTTCAAAGAGAGTGAGTTGCTTGGCGAGTCCTGAGGACGTTGAATGGAGCAAGGGGATGACTCCAGTATGCGTAACAGAGGAGGACGTGTTTGCTGTGTACATGATCAGGGACCACCAGTTGAAGCTGCTGAAGTGGTCGGAGAGTGTGGAGATTTCCCTCGACCCCTTCAATTACGAGCTCTTGACAATCTCTCCGGTGACGGTGATGCCGAAGAGATCAATCCATTTTGCTCCGATTGGATTGGTGAATATGCTAAACTCGGGTGGGGCAATTCGGAGTATGGAATTTGGGAAGCTGGAAAATGAGGTGATCATTGGGGTGAGAGGACATGGGGAGATGAGGGTGTTTGCTTCAGAGAAGCCTGTGAGCTGTGAAGTTGATGGAGTGGCCGTTGAATTTAGTTACGAGGATAAGATGGCTAACGTTCATGTTCCCTGGACTGCTTCTTCAAGGTTGTGTGTGGTGAAGTACTTGTTCTGA 2322 0.5168 MAPIIRKNNALPKTGLFQESLSSSIKLEAYTFLANGHPILTQVPPNITATSANNVSPVGCFVGFDSDRPSSCHVVPLGKLSGIKFMSIFRFKVWWSTHWAGSKGSDLENETQVMMLENCDLLRRPYVLLLPLIEGPFRASLQPGLHDYVDICLESGSTSVSGSTFRSCLYIHAGDDPYNLMKEAMKVIRDHLGTFKLLEEKTPPGVVDKFGWCTWDAFYLKVNPEGVREGVKGLAEGGCPPGFVIIDDGWQSFCHDGDETVGDSGSLNCSIPGEQMLNRLTSFEENSKFKDYYSRRSPSDRGLGALSRDLKEEFKSLEHVYVWHAFCGYWGGLRPKVPGLPEAKVVVPKLSEGAAKTMTDQAVVKILEVGVGLVAPEEAHKLYDGLHSHLQSAGIDGVKIDVTQILEMLSEEYGGRVELSKAYYKALTDSVKKHFKGNGVISSMQQCNDFMFLGTQTISLGRVGDDFWSIDPAGDPNGTYWLQGCHMVHCAYNSLWMGNFFHPDWDMFQSDHPCAEFHAASRAISGGPVYVSDSVGNHNFKLLNKLVLPDGSILRCQHYALPTRDSLFQDPLHDAKSMLKIWNLNKYTGVLGVFNCQGGGWCRVTRRNRSASECSKRVSCLASPEDVEWSKGMTPVCVTEEDVFAVYMIRDHQLKLLKWSESVEISLDPFNYELLTISPVTVMPKRSIHFAPIGLVNMLNSGGAIRSMEFGKLENEVIIGVRGHGEMRVFASEKPVSCEVDGVAVEFSYEDKMANVHVPWTASSRLCVVKYLF 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1725 773 Gene3D Aldolase class I 205 547 IPR013785 -
Prci9g1725 773 SUPERFAMILY (Trans)glycosidases 205 556 IPR017853 -
Prci9g1725 773 Pfam Raffinose synthase or seed imbibition protein Sip1 31 757 IPR008811 -
Prci9g1725 773 PANTHER - 30 764 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1725 Prci-Chr9 29308540 29312101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1725 14 773 Glycoside Hydrolase AT5G40390 59.846 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1725 K06617 - gmx:100798883 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1725 9 29308540 29312101 Prci9g1725 9 29308540 29312101 ECH