Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1675 ATGTTGCTTGAAATCTGTCACAATGGGTCCAGTCCACGGTTGAAAGTTGATGAGATTGGAACTTCAGCTTCGAACGAATCCGTTAAGCAAGAGGCAAGCGATGAATCAGATCATATGAGGGTCGAGAATTCGGTCTGGGAGACCTCGAGCAACGAGGGATCAACGGTTTCAGATTGCGAGAGTGCTGTTTCTGGTAGCACTTATGTGCGGCACCAGATGTTCGATGAAGGTTTTCTTAGACTCGTTGAAGGAGAGAGGGCTCATGATCTCATTCGCAGAAGATTCATTCTGGGTTTGGGGACGCTTGGGGCGAAAACGGAGGTCGTTGCAATCCATAGAAATGCTTGTTCTAGCGTTACGGCGCGAGCTCGAATTCAATCATTTGAGGTTTATATGCGAGCTGAGGAAAAGCGTCGTGGTAATGCCAATGTGAAGTATGCATGGTATGGGACTTCTGGCAAGGAAGAGGTACGAGAGATTATTTCCCATGGTTTTTGTAATGGCGGTAAAACTCAGAATAATGGACATTTTGGTTGCGGATTATCTCTCTCTTCAGATGATTCTCCTATGGAAAGTTTGAAAAGCTCTAATGTTGACAAAGACGGTCTAAGGCACTCATTACTATGTCGCGTTATTTTGGGGAGGCAGGAGCTTGTGCATCCTGGTTCTGAGCAATGCCATCCTAGTTCTGACGAATATGATTCAGGGGTGGACAGTCTTTCAGCTCCTAAGAAGTATATCATTGGGTGTACCCGGATGAATTCTCATATTTTTCCGGAATACGTTATAAGTTTCAAGGTTCCTGGCATGAAAGGGCTAACGAAGTTTGAAGAAACTTTAAAAACGCCATCTTCCCCTTGGATGCCATTTCCAAGTCTAATTTCTGTGCTCTCGAAGTTCTTGCCTCCATCTACTATTGCCTTGATCTCCAAATTCCACAAAGATCACACAGAAAAGAAGATTTCACGGCGTGAACTCATACAAAAAGTAAGACAAATAGCAGGAGACGAGTTGTTGATTTCAGTCATCAAATCTTTCAGAGCAAGATTAAAATTACATGACAAGTGCTGGTGCTCTACATCTTGCAATCTATTTCATGCTATGAACTTATATCACACCGGAGTTGACATGATGCTCACTGACTCGGAATCACTAATAGAGAGAAGACACAATCCGCTCGAGGGGTCACTGGTCACTGACTTGTTAACCGATCTTCACCGTACGGCCTGGTTGAGGAGCAGCGTGACTCTTGAGGATTTGATAAATGGTGAATTTTTTCAGGTTCAGATGAGGTCTTCTTCTGACAAGACCTCATCTGCTGTAAAAGCCACAGATTCGGCCCATTGCTCACCAAGTTTCCTGTGTGCCTGTCTGACGACGCTAGCAAATCCTTCCAATGATCAAACCATTGTAACTGTAGGAAACAGTTTTGATCTAGCAATGGACTATGTTGATGAAGAAGACCATGAAATAGATAGAAGCAGGCCCAAACGTATAATTTGGATGTGTCGGCCAATCTGA 1521 0.4392 MLLEICHNGSSPRLKVDEIGTSASNESVKQEASDESDHMRVENSVWETSSNEGSTVSDCESAVSGSTYVRHQMFDEGFLRLVEGERAHDLIRRRFILGLGTLGAKTEVVAIHRNACSSVTARARIQSFEVYMRAEEKRRGNANVKYAWYGTSGKEEVREIISHGFCNGGKTQNNGHFGCGLSLSSDDSPMESLKSSNVDKDGLRHSLLCRVILGRQELVHPGSEQCHPSSDEYDSGVDSLSAPKKYIIGCTRMNSHIFPEYVISFKVPGMKGLTKFEETLKTPSSPWMPFPSLISVLSKFLPPSTIALISKFHKDHTEKKISRRELIQKVRQIAGDELLISVIKSFRARLKLHDKCWCSTSCNLFHAMNLYHTGVDMMLTDSESLIERRHNPLEGSLVTDLLTDLHRTAWLRSSVTLEDLINGEFFQVQMRSSSDKTSSAVKATDSAHCSPSFLCACLTTLANPSNDQTIVTVGNSFDLAMDYVDEEDHEIDRSRPKRIIWMCRPI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1675 506 SUPERFAMILY ADP-ribosylation 84 266 - -
Prci9g1675 506 ProSiteProfiles PARP catalytic domain profile. 66 285 IPR012317 GO:0003950
Prci9g1675 506 MobiDBLite consensus disorder prediction 15 29 - -
Prci9g1675 506 ProSiteProfiles RST domain profile. 281 352 IPR022003 -
Prci9g1675 506 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 24 348 IPR044964 -
Prci9g1675 506 Pfam RCD1-SRO-TAF4 (RST) plant domain 283 347 IPR022003 -
Prci9g1675 506 MobiDBLite consensus disorder prediction 14 39 - -
Prci9g1675 506 Gene3D - 78 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1675 Prci-Chr9 28964031 28968249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1675 - - pcin:129319735 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2864 4 40630868 40631779 Prci9g1675 9 28964031 28968249 CCT
Prci9g1675 9 28964031 28968249 Prci9g1675 9 28964031 28968249 ECH