Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1612 ATGCCTCCGTCTTCAGCTCCGGTTCATAGCCTCAAACAAAAGGTGTTCACCTGCCTCACCAAGCTCTCCGACCGCGATACTCAGTCCCTCGCCGCCAATGAGCTCGAGTCCATTGCTCGGAACCTTGACTCAAACTCCGTACCAGTGTTCCTCTCCTGCATTCACTCCACCAATTCGTCAGACAAATCGCCGGTTCGTAAACAATGCGTGCACCTCATGCAGGTTCTTTCCGAAACGCACGGAAACTCACTCTCCCCCTATCTTTCCAAAATCCTTTCCCATATAGTTCGTCGGCTCCGGGACCCGGACTCCTCGGTTCGATCTGCTTGTGTGAATTCCGTGTCGGCATTGTCTGCACACATCACCAAGCAACCGTTTGCTTCTTTCCTGAAGCCGTTAACTGAGGCTCTGTTCACTGAGCAGGACCAGAATTCACAGTTAGGCGCGGCGCTTTGTCTGGCTTCTGCCATTGATGCAGCCCCTGACCCGGACCCGGCGAGATTGTCAAAGCTCTTGCCGAGGTTCGAGAAGTTATTGAGAAGCGGGAGCTTTAAGGCGAAGCCGGCGCTGTTGACCCTTATCGGAAGTGTTATTGAAGCTGGTGGAGTGTCGAGTCATGCGGTTTTGAGCAATTTGGTTCCGTGCACCGTGGAATTCCTGAGCAGCAACGACTGGTCGGCAAGGAAGGCTTCGGCCGAGGCATTGATGAAGTTGGCGATAGTGGAGCGGGACGTATTATCAGAATTCAAGGCCGGATACTTGAATGTCTTCGAGAACCGACGATTCGATAAGGTTAAGGTAGTTCGGGAAGTTATGAATCAGATGTTTGAGGCGTGGAAGCAGATACCTGATATATCGGATGGATTCTCTCCACCACCTAAATCACAATCTTCTTCCTCAGAAAATGTAAGTGATGGGCGCTATCCGGCATTCTCACAGAATTCATGCCGTCGTGCTTCTGTAATGCCTCGATTGTGGAAGAAATCCACTCCAGTTAGCAAATCAAGCCCTGATAGTTCTGTTGTGAGCAATGCTAAGAAGTTAAGCTTTAGTAGTAAGAGAATGAGCTCAAGTGTTTCGCCAAAACAAAGCCAAATGAATCGGGATGTTCCAATGGCTGTGCTCAGTGCTCCCTCCGCTATAGGTGCTAATCAGGGTTATCTTGAAGAGAGAAATGAGATGATACCGGGAAAAAACAAAAAGGAGAAAAGCAGCTTTTCAAGGCCAGAAATGAAACGAGCTCTTCCAAGTAAAAATCCTGATGAAAGAAAACACAAGTTTGGTGGCTCCAAAACTGGATCTCGCGTCGTTCCATGTCATGAAGAGAGCCAAGATTCAGTTACTATCAGTAATGTTGCTAAAGATTTGCATAGGAATGACAAAGATTGTGAAGAGTTAACTTTAATCCGCAGCCAGTTATTTCAAATTGAAAATCAGCAGTCCGATCTACTTGATCTTCTAGAGAGATTCATGAATAGCTCACAGAATGGAATGCGATCTTTAGAGTCTCGTGTACATCGCCTGGAGTTAGCGCTGGAAGGGCTCTCTCATGATTTGGCTGTATCAAATAGAAGGGTGGTTCATGCTGATGCTCCTTGGGATTCATGTTGCCTGCTGCCTGGTGCCGAAATTCTGAGCTCCAAATTCTGGAGGAAAACACAGGGCCGGTATTCTGGCTCCCAGTTCTCTAGATGCAGTCGCACCCCACCACAAGCTGCCATGTGGTACAGAGCTCACATGAAGAGTGATGCTGAAACTGAGTTGACAACTCCAAAGCGCAGGCTCCATGGTGATGGAGGATTCATCACAAATCCGCTGGCAGAAGTTCATAATAACTTGGGAGATACGAGACATTGCGCATAA 1863 0.4809 MPPSSAPVHSLKQKVFTCLTKLSDRDTQSLAANELESIARNLDSNSVPVFLSCIHSTNSSDKSPVRKQCVHLMQVLSETHGNSLSPYLSKILSHIVRRLRDPDSSVRSACVNSVSALSAHITKQPFASFLKPLTEALFTEQDQNSQLGAALCLASAIDAAPDPDPARLSKLLPRFEKLLRSGSFKAKPALLTLIGSVIEAGGVSSHAVLSNLVPCTVEFLSSNDWSARKASAEALMKLAIVERDVLSEFKAGYLNVFENRRFDKVKVVREVMNQMFEAWKQIPDISDGFSPPPKSQSSSSENVSDGRYPAFSQNSCRRASVMPRLWKKSTPVSKSSPDSSVVSNAKKLSFSSKRMSSSVSPKQSQMNRDVPMAVLSAPSAIGANQGYLEERNEMIPGKNKKEKSSFSRPEMKRALPSKNPDERKHKFGGSKTGSRVVPCHEESQDSVTISNVAKDLHRNDKDCEELTLIRSQLFQIENQQSDLLDLLERFMNSSQNGMRSLESRVHRLELALEGLSHDLAVSNRRVVHADAPWDSCCLLPGAEILSSKFWRKTQGRYSGSQFSRCSRTPPQAAMWYRAHMKSDAETELTTPKRRLHGDGGFITNPLAEVHNNLGDTRHCA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1612 620 Gene3D - 5 377 IPR011989 -
Prci9g1612 620 MobiDBLite consensus disorder prediction 290 311 - -
Prci9g1612 620 MobiDBLite consensus disorder prediction 397 429 - -
Prci9g1612 620 SUPERFAMILY ARM repeat 10 493 IPR016024 -
Prci9g1612 620 Coils Coil 498 518 - -
Prci9g1612 620 MobiDBLite consensus disorder prediction 327 367 - -
Prci9g1612 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 610 IPR033337 GO:0005874|GO:0008017
Prci9g1612 620 MobiDBLite consensus disorder prediction 286 311 - -
Prci9g1612 620 Pfam HEAT repeat 91 120 IPR000357 GO:0005515
Prci9g1612 620 MobiDBLite consensus disorder prediction 329 367 - -
Prci9g1612 620 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
Prci9g1612 620 MobiDBLite consensus disorder prediction 397 442 - -
Prci9g1612 620 FunFam TORTIFOLIA1-like protein 3 isoform A 3 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1612 Prci-Chr9 28658126 28661616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1612 - - qsa:O6P43_022767 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2941 4 41181686 41185598 Prci9g1612 9 28658126 28661616 CCT
Prci9g1612 9 28658126 28661616 Prci9g1612 9 28658126 28661616 ECH