Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1558 ATGAGCAGATTAATAATTTCCAACAGCATGTTGGAGGGTCCATCTTTTCTTGTTGCAAGGGAGTTACCAAGTTCATGTGAGGAAGAGAGCAGGTGGATTTACAACACTGTTCATATAATGGAGCTCTCAAGCAACAAGCGCAGACTAGATCAAGGAGAACAAATGGTGTTAGGAAAGTCTTGCAAACGTTCAGATGCTCCTGAGGAAGGAGAAACACGGTTGAGAGTGCGTGACCTTTCCCTTTCCAATAACCAAATAAATGACCAAAATCATGCAGCTGATCAGTCAGATTCAAGCTCACTGATTTACCAACTTGGGCGGGATATGTCAATTAACTGTCTACTTCGGTGCTCAAGGTCTGATTATGGTTCAATTGCCTCAGTGAATCAGAATTTTCGATCTCTCATTCGAAGTGGAGAACTGTATAAGCTCAGGCGGCAGTTTGGTATTATAGAACATTGGGTTTACTTCTCTTGCAATCTCCTTGAATGGGAGGCATTTGATCCGAACAATGGTCGATGGATGCGCTTGCCTAGAATGACTTGCAATGAATGCTTTATGTGTTCAGATAAGGAGTCACTTGCTGTTGGTACCGAACTTTTGGTGTTTGGAAAGGAAATCATGTCTCCTGTTATTTACAAATACAGCATCTTGACAAACTCATGGTCATCTGCTAAAGAAATGAATACACCTAGATGCTTGTTTGGTTCAGCAAGCCTCGGTGAAATAGCTATACTTGCTGGTGGTTGTGACCCACGAGGCAACATCTTAAGTTCAGCTGAGCTTTATAACTCAGAAACTGGAAATTGGGAGACTCTTCCAAACATGAACAGAGCAAGGAAAATGTGCTCTGGCGTATTTATGGATGGGAAATTTTATGTCATCGGGGGGATTGGAGTAGGCAACTCAAGACAGTTGACTTCTGGCGAGGAGTTTGATTTGCAGACAAGGAAATGGCGTGAAATACCCAATATGTTCCCTGGTCGATATGGAGGGGCTGGGATAGCTGAGGCACCAGCTGCTGCTGAGGCTCCTCCTTTAATTGCAGTTGTAAATAATGTATTGTATGCTGCAGATTATGCTCTACAGGAGGTAAGGAAGTATGATAAAGTCAGGAACTTATGGGTCACCATTGGAAGGCTACCTGAGCGGGCAGCTTCAATGAATGGGTGGGGGTTAGCTTTTCGTGCATGTGGAGATAGGCTAATCGTTATTGGTGGGCCTCGGGATTTAAATGTGAGGGCGATCGAAGTGAATGCTTGGGTCCCTGGGGAAGGCGAACCTCAGTGGAACCTGCTGGCCAGCAGACAATCAGGGAGCTTTGTGTATAATTGTGCTGTGATGGGATGCTAA 1353 0.4449 MSRLIISNSMLEGPSFLVARELPSSCEEESRWIYNTVHIMELSSNKRRLDQGEQMVLGKSCKRSDAPEEGETRLRVRDLSLSNNQINDQNHAADQSDSSSLIYQLGRDMSINCLLRCSRSDYGSIASVNQNFRSLIRSGELYKLRRQFGIIEHWVYFSCNLLEWEAFDPNNGRWMRLPRMTCNECFMCSDKESLAVGTELLVFGKEIMSPVIYKYSILTNSWSSAKEMNTPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSETGNWETLPNMNRARKMCSGVFMDGKFYVIGGIGVGNSRQLTSGEEFDLQTRKWREIPNMFPGRYGGAGIAEAPAAAEAPPLIAVVNNVLYAADYALQEVRKYDKVRNLWVTIGRLPERAASMNGWGLAFRACGDRLIVIGGPRDLNVRAIEVNAWVPGEGEPQWNLLASRQSGSFVYNCAVMGC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1558 450 SUPERFAMILY Kelch motif 160 447 IPR015915 GO:0005515
Prci9g1558 450 Gene3D - 146 436 IPR015915 GO:0005515
Prci9g1558 450 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 91 450 - -
Prci9g1558 450 FunFam F-box/kelch-repeat protein SKIP11 147 435 - -
Prci9g1558 450 SMART kelc_smart 243 290 IPR006652 GO:0005515
Prci9g1558 450 SMART kelc_smart 199 242 IPR006652 GO:0005515
Prci9g1558 450 SMART kelc_smart 291 339 IPR006652 GO:0005515
Prci9g1558 450 Pfam Kelch motif 279 325 IPR006652 GO:0005515
Prci9g1558 450 Pfam Kelch motif 231 277 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1558 Prci-Chr9 28308868 28311492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1558 105 381 Miscellaneous Gene Families AT4G33900 25.552 1.41e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1558 - - gmx:100788507 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1558 9 28308868 28311492 Prci9g1558 9 28308868 28311492 ECH