Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1554 ATGGCGTCGAGCATTGGTATCATGGACAGTGCTTACTTTGTCGGTCGGAATGAGATTTTGACTTGGATCAACAGAAGACTTCAACTCAATCTCTCGCGCGTTGAGGAGGCTGCATCAGGTGCTGTACAATGTCAGATAATGGACATGACCTATCCTGGGGTTGTTCCAATGCACAAGGTGAATTTTGATGCGAAATCAGAATATGATATGATCCAGAATTACAAAATTCTTCAGGAAGTATTCAACAAGCTGAAGATTGAGAAGCATATTGAAGTTAGCAGGCTTGTTAAAGGCCGACCTTTGGACAATCTGGAATTTCTACAATGGCTAAAACGTTATTGTGACTCTGTGAATGGTGGCATTATGAATGAGAACTATAATCCTGTGGAGCGTAGGAGTAAGTGTGGAAAGGATAAAAATCTTAAGAGTTCTTCAAAGAGCTCAAAATCACTGCAAACAAATGTTGTTAATAATTCTGTTTCGGGCAACACACTCAGTCCTAATAGAACCTCTGGGCCCAAGCAACATAGGTCAAGTGGTGCAGCAGGCGTGGCTAATTCTTCAGCAGATATCCAAGCTTTGTCCCAGGAGATAACTGATCTCAAGCTCTCTGTGGATGTCCTGGAAAAAGAAAGAGACTTTTACTACGCAAAACTAAGGGATATAGAAATTCTGTGTCAGACTCCACAACTGGAGAACGTACCTATGACCATAGCAATCAAGAAGATTTTGTATGCTGCTGATGCAAAGGAGTCAGCGTTAGATGAAGCTCAGGATTGCCTTAATCAAATTTTGGAAGCTGCTCAATCTGAAGAAGGAGGAGGAGGACGATCAGAAGTGGAAGCAGAAAATGAAGCTTGA 861 0.4193 MASSIGIMDSAYFVGRNEILTWINRRLQLNLSRVEEAASGAVQCQIMDMTYPGVVPMHKVNFDAKSEYDMIQNYKILQEVFNKLKIEKHIEVSRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRSKCGKDKNLKSSSKSSKSLQTNVVNNSVSGNTLSPNRTSGPKQHRSSGAAGVANSSADIQALSQEITDLKLSVDVLEKERDFYYAKLRDIEILCQTPQLENVPMTIAIKKILYAADAKESALDEAQDCLNQILEAAQSEEGGGGRSEVEAENEA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1554 286 MobiDBLite consensus disorder prediction 132 184 - -
Prci9g1554 286 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 6 267 IPR027328 GO:0008017
Prci9g1554 286 SUPERFAMILY EB1 dimerisation domain-like 191 249 IPR036133 GO:0008017
Prci9g1554 286 Gene3D - 181 264 - -
Prci9g1554 286 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 183 253 IPR004953 GO:0008017
Prci9g1554 286 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Prci9g1554 286 Coils Coil 191 211 - -
Prci9g1554 286 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Prci9g1554 286 Pfam EB1-like C-terminal motif 208 246 IPR004953 GO:0008017
Prci9g1554 286 Gene3D - 6 134 IPR036872 -
Prci9g1554 286 FunFam RP/EB family microtubule-associated protein 6 134 - -
Prci9g1554 286 FunFam Microtubule-associated protein RP/EB family member 1B 189 264 - -
Prci9g1554 286 MobiDBLite consensus disorder prediction 145 184 - -
Prci9g1554 286 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1554 Prci-Chr9 28282756 28286546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1554 K10436 - gmx:100808026 414.461