Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1515 ATGAGTCAGGTATTCGAAGGGTACGAGCGTCAATACTGTGAGCTATCGGCTAATCTTTCCCGGAAATGCACGGCAGCGTCTGCCCTTGATGGAGAGCAGAAGAAGCAGAAGCTTTCTGACATCAAAGATGGTCTAGATGAAGCTGACACATTGATTCGGAAAATGGACCTTGAGGCCAGGAGTTTGCAGCCAAATATAAAGGCAACGTTGCTTGGCAAGTTAAGGGAATATAAAACTGATCTGAACACTTTGAAAAATGAAGTTAAAAGAATCTCATCAATTAATGCCAACCTGGCGGCACGAGATGACTTGCTAGAGTCGGGAGATGCTGGTGCGCTAATGGTATCAAATGATCAAAAAGGAAGACTGTTGATGTCAACTGAGAGGTTAAACCAGTCCACTGAGAGAATAAAGGCCAGTAGGAAAGCAATGCTGGAGACTGAGGAGCTTGGAGTCTCTATCCTCCAAGACCTGGATCATCAACGTCAATCTCTACTCCATGCCAATCAGACGCTCCATGGAGTGGATGATAACATCAGCAAAAGCAAGAAGATTTTGTCATCAATGTCGAAAAGAATGAAAAGGAATAAATGGATTGTGGGCTCCTTTTTCACAGCTCTGGTCCTAGCAATTCTATTGATCCTATATTTCAAGCTGACTCGCTAG 666 0.4384 MSQVFEGYERQYCELSANLSRKCTAASALDGEQKKQKLSDIKDGLDEADTLIRKMDLEARSLQPNIKATLLGKLREYKTDLNTLKNEVKRISSINANLAARDDLLESGDAGALMVSNDQKGRLLMSTERLNQSTERIKASRKAMLETEELGVSILQDLDHQRQSLLHANQTLHGVDDNISKSKKILSSMSKRMKRNKWIVGSFFTALVLAILLILYFKLTR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1515 221 Pfam Vesicle transport v-SNARE protein N-terminus 12 90 IPR007705 GO:0006886|GO:0016020
Prci9g1515 221 PIRSF Membrin-2 1 218 IPR027027 GO:0005484|GO:0005794|GO:0016192
Prci9g1515 221 Gene3D - 117 197 - -
Prci9g1515 221 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 3 216 - -
Prci9g1515 221 Gene3D - 1 97 IPR038407 -
Prci9g1515 221 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 1 99 - -
Prci9g1515 221 Coils Coil 67 101 - -
Prci9g1515 221 CDD SNARE_Vti1 127 188 - -
Prci9g1515 221 FunFam Vesicle transport through interaction with t-SNAREsB 117 197 - -
Prci9g1515 221 Pfam Snare region anchored in the vesicle membrane C-terminus 128 193 - -
Prci9g1515 221 SUPERFAMILY t-snare proteins 6 91 IPR010989 GO:0016020|GO:0016192
Prci9g1515 221 SUPERFAMILY SNARE fusion complex 130 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1515 Prci-Chr9 28056213 28058754 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1515 K08493 - cit:102625899 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1515 9 28056213 28058754 Prci9g1515 9 28056213 28058754 ECH