Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1365 ATGGCATTAGATTGTAGGTATCAACTAATGGTGTTGCTGCTCGTCTTCTGTGTCATGGCCTCAGGGGGTCTTGGCGTTGGAGTGAACTGGGGAACTATGGCTTCCCATCAGCTGCCTCCCGAGAAGGTGGTGAAGATGCTGAAGCAAAATGGGTTTGATAAATTGAAGCTGTTCGATGCGGACGAGTGGATCATGGCGGCTCTGATGGGGACTGATATCGAAGTGATGCTAGCAATCCCCAATGACATGTTGGAAGAGATGAGTAAGAATTCTAGTGCCGCGGATTCTTGGGTCGCTGAAAATGTGACCGGTTACTTGTATCCTGGTGGACTCAATATCAAGTTTGTTGCCGTGGGTAACGAGCCTTTCCTTAAAGCATATAATGGCACCTATCTGCATACAACTTTCCCAGCTCTTAAGAACATACAAACATCACTCTATAATGCTGGCTTGGGTTCAAAGGTTAAAGTCACAGTTCCCTTCAATGCAGACATTTACTTTTCCCCTGAATCAAATCCAGTGCCATCAGCTGGTGACTTCAGGCCTGAGTTACGAGACCTCACTATTGAAATCATCCAATTCTTGTATTCATGTGATGCCCCTTTTACAGTAAATATATATCCCTTCCTTAGTCTTTATGGCAACGACAACTTCCCCTTTGAATTTGCATTTTTTGAGGGAAACAGCAAACCTCTTAGAGATGGAAATTCACTTTACGCTAATGTTTTTGATGCCAATCTAGACACTCTTTTATGGGGTTTAGAAAAGGCAGGGTACCCTGACATGCAAGTCCTCATCGGAGAAGTCGGTTGGCCAACTGATGGTGATAAGAATGCTAACATTCAAAATGCAAAGAGGTTCAACCAAGGTTTGCTTAAACATGTTCAAAGTGGAAATGGTACCCCTAAAAGGAGAGGGATTATTGACATGTATCTGTTCAGCCTCATTGATGAGAATGCAAAAAGTGTTGCTCCTGGCACCTTTGAGAGGCACTGGGGGATTTTTGAGTTTGATGGGAAGCCAAAGTATGAATTAGATCTAACAGGTCAAGAACTAAACAAGGGTCTGGTTCCTGTGCATGGTATAAAATATATGGAAAGACAATGGTGTGTTTTGAACACTGATGCTGGTACTAGTGCACTATTCTTGGCTCATAGCATTGACTATGCTTGTACTCTATCTGACTGTACTGCGCTGGGTTATGGATCTTCTTGCAATAATCTGAGCCTCCAAGGGAATGCATCATATGCCTTCAACATGTATTATCAAGTACATAACCAAAGGGATTGGGGTTGTGATTTCTCTGGTTTGGGTATTATAACAGATAAGGATCCATCAGAAAACGGATGCCAGTTCCCTGTGATGATTTCTTATGGTTCTTCATTGATGCATGGAAGGCTATGGGATATCCTAAGGAATACTGTGGGTGTATGTACCTTGATTATTATTTTGCTTTAG 1458 0.4259 MALDCRYQLMVLLLVFCVMASGGLGVGVNWGTMASHQLPPEKVVKMLKQNGFDKLKLFDADEWIMAALMGTDIEVMLAIPNDMLEEMSKNSSAADSWVAENVTGYLYPGGLNIKFVAVGNEPFLKAYNGTYLHTTFPALKNIQTSLYNAGLGSKVKVTVPFNADIYFSPESNPVPSAGDFRPELRDLTIEIIQFLYSCDAPFTVNIYPFLSLYGNDNFPFEFAFFEGNSKPLRDGNSLYANVFDANLDTLLWGLEKAGYPDMQVLIGEVGWPTDGDKNANIQNAKRFNQGLLKHVQSGNGTPKRRGIIDMYLFSLIDENAKSVAPGTFERHWGIFEFDGKPKYELDLTGQELNKGLVPVHGIKYMERQWCVLNTDAGTSALFLAHSIDYACTLSDCTALGYGSSCNNLSLQGNASYAFNMYYQVHNQRDWGCDFSGLGIITDKDPSENGCQFPVMISYGSSLMHGRLWDILRNTVGVCTLIIILL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1365 485 SMART X8_cls 368 452 IPR012946 -
Prci9g1365 485 FunFam Glucan endo-1,3-beta-glucosidase 5 25 353 - -
Prci9g1365 485 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Prci9g1365 485 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
Prci9g1365 485 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 441 IPR044965 GO:0004553|GO:0005975
Prci9g1365 485 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Prci9g1365 485 Gene3D Glycosidases 25 354 - -
Prci9g1365 485 Gene3D - 363 457 - -
Prci9g1365 485 FunFam Glucan endo-1,3-beta-glucosidase 8 364 461 - -
Prci9g1365 485 Pfam X8 domain 368 438 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1365 Prci-Chr9 27148019 27150178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1365 25 456 Miscellaneous Gene Families AT2G19440 58.796 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1365 - - gmx:100802345 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1365 9 27148019 27150178 Prci9g1365 9 27148019 27150178 ECH