Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1317 ATGACCAGGGAACAGCTCTCTCTAGAATTAGATTACCAGGAAACAGAAAGAGACATCCCTGTCCCAAGTCTCAACTACAATCGGTCTATAAAGCCTCCCAACTCTAGCAGCAGATTTTATCACAGGAACTACTTGATCACCAGCTTTTTTCTGAACTATTACTCTATTCACATCTGTCATACCATTTCTGGGCAGCTAATTCTGTTATTCATCATTCTTCTTAAGAGTAGTATATTGGCAAAGATGAGCTACACCGGACGTGATTGGCTATGTGGTGCTTGCCAGCATGTTAATTTCAGGAGGAGAGATGCATGCCAACGTTGTGGATACCCCAAGTTTGGAGGTTCTGAGTCATTGATTTGTGGAAGCAACAAGAACAGTGAAGCATTGCCAGGAGACTGGTTTTGCAGTGCTGAGAACTGTGGAGCTCACAACTATGCAAGCCGATCAAGATGCTTTAGGTGTGATGCTCTCAGAGATGACAACGCTGTCTCTGACAGATATGGACTTGGCAGCAGCATGCCCCCACCAGGATGGAAGCCTGGTGATTGGATGTGCTCTAGCTGCGGAGCCCATAACTACGCTAATAGGGAAGAATGCTTCAAGTGCAAAATACCAAATGATTATGGGCGTGCAAACTGA 642 0.4517 MTREQLSLELDYQETERDIPVPSLNYNRSIKPPNSSSRFYHRNYLITSFFLNYYSIHICHTISGQLILLFIILLKSSILAKMSYTGRDWLCGACQHVNFRRRDACQRCGYPKFGGSESLICGSNKNSEALPGDWFCSAENCGAHNYASRSRCFRCDALRDDNAVSDRYGLGSSMPPPGWKPGDWMCSSCGAHNYANREECFKCKIPNDYGRAN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1317 213 SMART zf_4 87 111 IPR001876 -
Prci9g1317 213 SMART zf_4 182 206 IPR001876 -
Prci9g1317 213 SMART zf_4 132 158 IPR001876 -
Prci9g1317 213 SUPERFAMILY Ran binding protein zinc finger-like 177 207 IPR036443 -
Prci9g1317 213 PANTHER ZINC FINGER PROTEIN 125 208 - -
Prci9g1317 213 SUPERFAMILY Ran binding protein zinc finger-like 83 115 IPR036443 -
Prci9g1317 213 ProSiteProfiles Zinc finger RanBP2 type profile. 180 209 IPR001876 -
Prci9g1317 213 SUPERFAMILY Ran binding protein zinc finger-like 124 162 IPR036443 -
Prci9g1317 213 ProSitePatterns Zinc finger RanBP2-type signature. 184 203 IPR001876 -
Prci9g1317 213 Gene3D - 177 209 - -
Prci9g1317 213 Gene3D - 121 162 - -
Prci9g1317 213 Gene3D - 82 114 - -
Prci9g1317 213 ProSitePatterns Zinc finger RanBP2-type signature. 134 155 IPR001876 -
Prci9g1317 213 ProSiteProfiles Zinc finger RanBP2 type profile. 130 161 IPR001876 -
Prci9g1317 213 Pfam Zn-finger in Ran binding protein and others 180 204 IPR001876 -
Prci9g1317 213 Pfam Zn-finger in Ran binding protein and others 131 159 IPR001876 -
Prci9g1317 213 Pfam Zn-finger in Ran binding protein and others 88 112 IPR001876 -
Prci9g1317 213 ProSiteProfiles Zinc finger RanBP2 type profile. 84 114 IPR001876 -
Prci9g1317 213 ProSitePatterns Zinc finger RanBP2-type signature. 89 108 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1317 Prci-Chr9 26833521 26835095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1317 - - pcin:129319393 449.129