Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1221 ATGTCTGGAGGCACGCAGAATAGTATAAGAAAAGCTCTCGGAGCCCTGAAAGACACGACGACAGTTTCATTGGCTAAAGTCAACAGTGATTACAAGGAATTGGACATTGCTATAGTGAGAGCCACAAATCATGTGGAGCGTCCGTCAAAGGAGAAACATATGAGAGCTATTTTTTCTGCAATCTCTGCTACTAGACCTCGGGCTGATGTTGCTTACTGCATCCATGCTCTTGCAAGACGATTGTCAAAGACACATAACTGGGCGGTTGCATTAAAAACTTTAATTGTTATTCACCGTGCTCTGAGGGAAGTGGATCCCACATTCCATGAGGAACTCATAAATTATGGCAGAAGCAGAAGTCATATGCTCAACATGTCTCATTTTAAAGATGATTCAAGTCCAAATGCATGGGATTATTCGACATGGGTCCGCACTTATGCATTGTTTTTGGAGGAAAGACTGGAATGTTTTCGTGTATTGAAGTATGACATTGAGACAGATCGTCCAAGGACTAAAGATTTGGACACTGCAGAGTTGTTGGAACAGTTGCCAGCATTACAGGAACTTCTGTTTCGAGTTCTTTGTTGTCAGCCAGAGGGAGCAGCTGTGAACAACTTTGTCATTCAGCTAGCACTCTCAATGGTCGCTTCAGAAAGCATAAAAATTTACCAAGCCATCAGTGATGGCACTATCAATCTGGTTGATAAGTTTTTTGAGATGCAGCGCTCTGATGCTTTCAGAGCTCTTGATATATATCGGAGGGCTGGGAAGCAGGCTGAGAGACTGTCTGAGTTTTATGAAATATGTCGAAATCTTGATATTGGACGAGGAGAGAAATTTGTTAAAATTGAGCAGCCCCCTGCATCATTTCTACAAGCCATGGAGGAGTATCTCAAAGAAGTTCCCCGGGATTCAAGCAAGGATCAGGCCATTGACAACAAAATTGCCTCTCCAAAAGAAGTTTTGGCTATAGAATACAAGAAGACATCGGAGACGCAGGAGGCACCTGCAGCACCTGCGCAGGAGTCACCTCTGGCTCCTGAACCTGTAAAAGTGGAAGCACCTGCTGCACAACCACCACTTGATTTGTTGAATTTGGATGATCCTGTTCCAGCTGCTTCAGAGTTGGAAGAGAAGAATGCCTTGGCATTAGCCATTGTTCCTATTGCTGATCAGCCAACTTCTGTTTCAAAACAAGAAAATGGAATTACAGGCTGGGAATTGGCACTTGTTACAGCTCCAAGTTCTAATGAGAGTGCTTCTGCAGCTAGCAAACTTGCGGGAGGGTTAGACAAGCTTACACTAGACAGCCTATATGATGATGCGGTCAGAAGGAACAGCCAGAACGTGAGCTATAATCCATGGGAACCAGCACCTGCGGCAAGCATGATGCAACCAACAATGCATGATCCATTTTTCGCTTCTAATGCAGTTGCTGCTCCACCTTCTGTTCAGATGGCTGCTATGTCAAACCAGCAGCAGGCTTTCATGTTTCATCCTCCTCATCATCAGCAGCAGCAGATGATGATGATGGCCCCTCAGCAACCATCTGCTAATCCTTTTGGGAATCCTTATGGAGCTACTGTCCACCCCTATGGCTCAGGTATGCCTGTTCAAGCGTACAATCCATACACCGGTCTCATCTAG 1647 0.4493 MSGGTQNSIRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPSKEKHMRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMSHFKDDSSPNAWDYSTWVRTYALFLEERLECFRVLKYDIETDRPRTKDLDTAELLEQLPALQELLFRVLCCQPEGAAVNNFVIQLALSMVASESIKIYQAISDGTINLVDKFFEMQRSDAFRALDIYRRAGKQAERLSEFYEICRNLDIGRGEKFVKIEQPPASFLQAMEEYLKEVPRDSSKDQAIDNKIASPKEVLAIEYKKTSETQEAPAAPAQESPLAPEPVKVEAPAAQPPLDLLNLDDPVPAASELEEKNALALAIVPIADQPTSVSKQENGITGWELALVTAPSSNESASAASKLAGGLDKLTLDSLYDDAVRRNSQNVSYNPWEPAPAASMMQPTMHDPFFASNAVAAPPSVQMAAMSNQQQAFMFHPPHHQQQQMMMMAPQQPSANPFGNPYGATVHPYGSGMPVQAYNPYTGLI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1221 548 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Prci9g1221 548 FunFam Clathrin assembly protein AP180 8 164 - -
Prci9g1221 548 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Prci9g1221 548 Gene3D ANTH domain 165 319 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Prci9g1221 548 SMART enth_2 32 164 IPR013809 -
Prci9g1221 548 Gene3D - 7 164 IPR008942 -
Prci9g1221 548 PANTHER CLATHRIN ASSEMBLY PROTEIN 9 495 IPR045192 GO:0048268|GO:0072583
Prci9g1221 548 MobiDBLite consensus disorder prediction 330 349 - -
Prci9g1221 548 CDD ANTH_N 34 157 - -
Prci9g1221 548 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Prci9g1221 548 SUPERFAMILY GAT-like domain 169 300 - -
Prci9g1221 548 FunFam putative clathrin assembly protein At5g35200 166 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1221 Prci-Chr9 26144676 26150616 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1221 K20043 - gmx:100815239 851.662