Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1215 ATGGCGGGAAACGACTGGATAAACAGCTACTTGGAGGCGATACTGGATGTCGGACCGGGTCTCGATGATGCAAAATCCTCCTTGCTTCTCAGAGAGAGAGGGAGGTTCAGTCCCACTCGCTACTTCATTGCCGAGGTCATCTCTGGTTTCGATGAGACCGATCTCTACCGCTCTTGGGTTCGGGCCTCTGCAACGAGGAGTCCCCAGGAGAGGAATACTAGATTGGAGAATATGTGTTGGAGGATTTGGAACTTGGCTCGGCAAAAGAAGCAGCTTGAGAATGAGGAAGCCCAAAGATTAAATAAACGCCATCTTGAACGTGAAAGAGGCCGCAGAGAAGCAACTGCTGATATGTCCGAGGACTTATCGGAGGGAGAAAAAGGAGATTCAGTGAGTGATGTTTCAGCTCATGGCGATAGTGCGAGAGGAAGACTTCCTAGAATCAGTTCTGCTGATGCTATGGAGACGTGGGCTAACAGTCAAAAGGGGAAGAAACTCTATATTGTACTCATAAGCATTCACGGTCTAATAAGAGGTGAGAATATGGAGCTGGGACGGGATTCTGATACTGGCGGTCAGGTTAAGTATGTTGTGGAACTTGCAAGGGCCTTGGGCTCAATGCCAGGAGTTTATAGAGTTGATTTGCTAACTAGACAAGTATCATCACCAGATGTAGATTGGAGTTATGGGGAGCCAATAGAAATGTTGACTCCAAGAAACCAAGATGATTTAACAGATGACGGGGGAGAGAGCAGTGGTGCTTATATAATTCGTATACCCTTTGGTCCAAGGGATAAATATATTCCAAAAGAACATCTTTGGCCTTATATTTCTGAATTTGTTGATGGTGCTCTTGGCCACATTATACAGATGTCAAAAGCTCTTGGGGAGCAAATTGGTGGTGGGCATGCTGTTTGGCCTGTTGCCATTCATGGACATTATGCTGATGCTGGGGACTCTGCTGCTCTTCTATCTGGTGCTTTAAATGTTCCAATGCTTTTCACTGGCCACTCACTTGGTAGGGATAAGTTGGAACAGCTTCTGAAGCAAGGTCGACTGTCAAGAGATGAAATAAAAACATACAAGATTATGCGTCGAATAGAAGCTGAGGAATTAGCCCTTGATGGTTCTGAAATAGTCATAACAAGCACTAGACAGGAAATAGAACAACAATGGCGTTTGTATGATGGCTTTGATCCAGTATTGGAGCGCAAGATACGAGCAAGGATTAGGCGTAATGTGAGTTGTTATGGTAGATTCATGCCTCGTATGGCGATAATTCCTCCTGGTATGGAGTTCCATCACATAATTCCGCCAGATGGTGATATTGAAGGTGAACCAGATGGGAATTTGGATCATCCTGCTCCCCAGGATCCGCCTATTTGGTCTGAGATAATGCGGTTCTTTACCAACCCCCGCAAGCCAATGATCCTTGCCCTTGCTAGACCTGACCCCAAAAAGAACATCACAACTTTGGTGAAAGCATTTGGAGAGTGCCGTCCCCTACGAGAGCTAGCAAATCTGACATTAATTATGGGTAACAGAGATGGAATTGATGAAATGTCAAGCACAAATGCCTCTGTTCTTCTCTCAGTACTTAAGCTGATTGACAAGTATGATTTGTATGGGCAAGTGGCATATCCCAAACATCACAAACAATCTGAAGTCCCTGACATATATCGTCTAGCTGCAAAGACAAAGGGTGTTTTTATCAATCCAGCTTTTATTGAGCCATTTGGTCTTACGTTAATTGAGGCAGCTGCTCATGGTTTGCCAATTGTTGCAACGAAAAATGGAGGTCCTGTTGATATTCATCGGGTACTTGACAATGGTCTACTTGTGGATCCCCATGATCAGCACTCTATTTCAGATGCTCTTTTGAAGCTTGTTAGCAACAAGCAATTGTGGGCAAAATGTAGACAGCATGGGTTGAAGAATATTCATCTATTTTCATGGCCTGAGCATTGCAAGACTTACCTGTCTAAAATAGCCACCTGTAAACCAAGGTATCCACAATGGCTGCGAAATGATGATGGAGCTGAAAGTTCAGAATCAGAATCACCAGGTGATTCCTTGAGGGATATTCACGATTTATCTCTAAACCTGAAGTTTTCACTGGATGGAGAGAGGAGTGGGGGTGGTGGAAATGATACCTTGGAGTCTGAAGGAAATGCAGCTGACAGAAAAACTAAATTAGAGAATGCTGTGTTTTCATGGTCAAAGGGCATCTCCAAGGAGACACGCAAATCTGATCAAAATACAAATGCTAGTAAATTTCCACCACTGAGGAGGAGAAAACATCTGTTTGTCATTGCAGTTGACTGTGATACTACTGAAGGTCTTCTTGAAACCATTAAAGTGATTTTTGAGTCTGCAGAAAAGGAGAGGGCTGAAGGCTCTGTTGGGTTCATTTTGTCAACATCCTTAACAATATCTGAGATACACTCATTCCTGGTCTCGAGTGGCTTGAGCCCTAATGATTTTGATGCTTATATTTGCAATAGTGGCAGTGATCTTTACTATCCCTCCCTCACTTCTGAAGATCGTGCCTTTGTGGTTGACTTGTATTATCACTCACATATTGAATACCGTTGGGGTGGGGAAGGGCTGAGGAAGACTTTGGTACGTTGGGCAGCGTCAATCACTGATAAGAAGGATGATATTGAGGAGCAAATTGTGACTCCTTCTGAACGGCTCTCTACTGACTACTGTTATGCTTTCAAGTTGCAAAGCCAGAAAAGGTAACTTGTTCCCCCTGTGAAGGAACCGAAGCTTCTGAGAATCCAGGCTCTACGCTGTCATGTTATTTATTGTCAAAATGGGACAAGAATGAATGTAATTCCAGTAGTGGCATCTCGTTCCCAGGCCCTCAGGTACCTCTATGTTCGATGGGGTTTTGAACTGTCAAAGATGGTGGTGTTTGTGGGAGAATGTGGTGAAACTGATTATGAAGGATTGCTTGGTGGTCAACATAAAAGTGTTATACTGAAGGGAGTGGGTAGCAGTGCAATCAGCCAACTCCATGACAATAGAAGCTATCCTCTTTCAGATGTCATTGCACTGGACAGCCCCAACATTGTTGAGGCAAGCGAAGGCAGCAGCAGTGTGGACATCCGGTCCCTGATAGAAGAAGTAGGATTTCTCAAGGACTGA 3153 0.4421 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFIAEVISGFDETDLYRSWVRASATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRLNKRHLERERGRREATADMSEDLSEGEKGDSVSDVSAHGDSARGRLPRISSADAMETWANSQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPIEMLTPRNQDDLTDDGGESSGAYIIRIPFGPRDKYIPKEHLWPYISEFVDGALGHIIQMSKALGEQIGGGHAVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINXTYKIMRRIEAEELALDGSEIVITSTRQEIEQQWRLYDGFDPVLERKIRARIRRNVSCYGRFMPRMAIIPPGMEFHHIIPPDGDIEGEPDGNLDHPAPQDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTNASVLLSVLKLIDKYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQHSISDALLKLVSNKQLWAKCRQHGLKNIHLFSWPEHCKTYLSKIATCKPRYPQWLRNDDGAESSESESPGDSLRDIHDLSLNLKFSLDGERSGGGGNDTLESEGNAADRKTKLENAVFSWSKGISKETRKSDQNTNASKFPPLRRRKHLFVIAVDCDTTEGLLETIKVIFESAEKERAEGSVGFILSTSLTISEIHSFLVSSGLSPNDFDAYICNSGSDLYYPSLTSEDRAFVVDLYYHSHIEYRWGGEGLRKTLVRWAASITDKKDDIEEQIVTPSERLSTDYCYAFKLQSQKRXLVPPVKELXKLLRIQALRCHVIYCQNGTRMNVIPVVASRSQALRYLYVRWGFELSKMVVFVGECGETDYEGLLGGQHKSVILKGVGSSAISQLHDNRSYPLSDVIALDSPNIVEASEGSSSVDIRSLIEEVGFLKD 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1215 1052 MobiDBLite consensus disorder prediction 94 133 - -
Prci9g1215 1052 Pfam Glycosyl transferases group 1 471 644 IPR001296 GO:0016757
Prci9g1215 1052 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 1047 - -
Prci9g1215 1052 NCBIfam sucrose-phosphate synthase 1 1047 IPR012819 GO:0005985|GO:0046524
Prci9g1215 1052 Gene3D Glycogen Phosphorylase B; 168 664 - -
Prci9g1215 1052 Coils Coil 75 107 - -
Prci9g1215 1052 CDD GT4_sucrose_synthase 167 662 - -
Prci9g1215 1052 MobiDBLite consensus disorder prediction 675 694 - -
Prci9g1215 1052 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 182 662 - -
Prci9g1215 1052 MobiDBLite consensus disorder prediction 707 726 - -
Prci9g1215 1052 MobiDBLite consensus disorder prediction 94 144 - -
Prci9g1215 1052 Gene3D Glycogen Phosphorylase B; 432 652 - -
Prci9g1215 1052 Pfam Sucrose-6F-phosphate phosphohydrolase 772 1000 IPR006380 -
Prci9g1215 1052 MobiDBLite consensus disorder prediction 680 694 - -
Prci9g1215 1052 FunFam Sucrose-phosphate synthase 1 432 652 - -
Prci9g1215 1052 Pfam Sucrose synthase 253 391 IPR000368 GO:0005985|GO:0016157
Prci9g1215 1052 CDD HAD_SPS 769 1001 IPR035659 -
Prci9g1215 1052 MobiDBLite consensus disorder prediction 438 457 - -
Prci9g1215 1052 MobiDBLite consensus disorder prediction 438 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1215 Prci-Chr9 26090109 26097253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1215 1 1039 Glycosyltransferase AT5G20280 76.268 0.0 1626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1215 K00696 - gmx:100127429 1880.14