Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1193 ATGGTGAAACTGAAGATTGCCGGTACATGGGCAGGAGTGTTAGAGGTTGAACTCGAGACTTGGACGCTACCCATGTTGAGGGAAGAAATCGCCAAGCGATCCAACTGTGGCGTCGACTCCATCAATTTGATATGTGCTGGCAAAATTTTGAAAGACGGCGATGGCCAAGAGAAATTGAGCCAAATGGGTATAAAAAATAATGCCAAAATTCTTGCGAGCCGTGTCTGTGCTGAAGAAGGCAAGGTTTTGATGGCTGAGGAAGAACGGACTCGCAGACTTTCCCGAGTCAAGGCAGCTGCCACAGCACTCGCCAAAAGGCATGCTGATGGTTCATTACCTATGGAAGACTTCAACATAGAAGTTGAAGATCAAAGTGGACAAAAAGTGCAGTTAGGTTCTGAGACTGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAATGGGAAACGTCTTATTAGACAGAAAAACTACAATGATGCTTTAGAAGTGCTGTCTATGGGTGAGGAGGCATTCTCTCTTTGTGATCCAAAGGTCATTGAGCTTGTTGACAATGTCCCAATACTGCAAATAGACATGGTGTGGTGCTACTTTATGATCCGAGATATCAGATGGCTATCAGAGGCTGGAAAGCGTCTTGAAATGGCTAGGGCTGGGATTGAACGTGCTCATGGAAAGGATTCCCAGCGCCTTAGAGTTCTACAGGGAGGTCGTTATCCTGAACTTGCACTGCATTTGAGACTAGAGCTACTTGAAGGGGTGGTAGCTTATCACAATGGTAAGGTGGAAAAATCAAGAGATGTGCTGACCTCTGCAAAAGCAAAATTCATGCAGCTGCAAGTGTCAGATGAAGTCTTGTCATTTGTTATGAGCATGGGATTCAAAGAGCGTGATGCAAAGAGAGCATTACGGATGAACAATCAAGATGTGGGAGGTGCCATTGATTTTCTTGAGGAGGAGAAGGCAAAAAAACAGCGAAAACGAGAAGAAGATATGAGGAGAAGAGATGAAATTAGGGAACAAAAGCGTTATGGGTTGACTCCCTTGAAGAAAGCTGTGGATCTGCAGAAGTTGAAGGATTTGGTCTCTTTGGGATTTGAGAAGGAACTTGCTGCTGAAGCTCTTCGAAGAAACGAAAATGATTTTGATGAGGCATTGAATGATTTGACAAATCCAGAAACTAATTCTGCTATACAGGTTCACATTGAAACAAGGAAAAGGAAAAGACTGAGGCAAGCAACAGAGTCTCAAATTGAAAATTTTGTCCGCATGGGGTTTGAAAGATCAAAAGTGGTATCTGCTTTCGAGATTGGTGGCCCTTTGGATCAAATAATGCAAAGACTGACCGCACATGCTGAGGAAAACACACAAGTCGAGGCCAATTCAACTGTTAACAGTTCGAGTTCTTCTGCTCCCTCGCCAGACAACATTGGTTCTAACATTCCAGGCCTAGCCGAGGACGTTGAAGGTCTGTTGGCTGATCTCAGCAAAGCAGAGGACCGAGATGTGGAAATGGAAGATGAACTTTCTGCAGATATAGCAAAAGCTGATGCGTTGGCTGACTATGATGTCGAAGTTAATATAGAAGGGGGAGCCATAGAAGAATATCTTTCTCTGCTGGAGTCAGCAGCCAGCAGCAGTGGGCAAAAGTTGCCTTCCCAGTAA 1668 0.4454 MVKLKIAGTWAGVLEVELETWTLPMLREEIAKRSNCGVDSINLICAGKILKDGDGQEKLSQMGIKNNAKILASRVCAEEGKVLMAEEERTRRLSRVKAAATALAKRHADGSLPMEDFNIEVEDQSGQKVQLGSETDQRAVMMGLMLHANGKRLIRQKNYNDALEVLSMGEEAFSLCDPKVIELVDNVPILQIDMVWCYFMIRDIRWLSEAGKRLEMARAGIERAHGKDSQRLRVLQGGRYPELALHLRLELLEGVVAYHNGKVEKSRDVLTSAKAKFMQLQVSDEVLSFVMSMGFKERDAKRALRMNNQDVGGAIDFLEEEKAKKQRKREEDMRRRDEIREQKRYGLTPLKKAVDLQKLKDLVSLGFEKELAAEALRRNENDFDEALNDLTNPETNSAIQVHIETRKRKRLRQATESQIENFVRMGFERSKVVSAFEIGGPLDQIMQRLTAHAEENTQVEANSTVNSSSSSAPSPDNIGSNIPGLAEDVEGLLADLSKAEDRDVEMEDELSADIAKADALADYDVEVNIEGGAIEEYLSLLESAASSSGQKLPSQ 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1193 555 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 353 393 IPR015940 -
Prci9g1193 555 ProSiteProfiles Ubiquitin domain profile. 22 70 IPR000626 GO:0005515
Prci9g1193 555 MobiDBLite consensus disorder prediction 459 478 - -
Prci9g1193 555 Coils Coil 442 462 - -
Prci9g1193 555 SUPERFAMILY UBA-like 258 320 IPR009060 GO:0005515
Prci9g1193 555 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 281 321 IPR015940 -
Prci9g1193 555 Coils Coil 489 509 - -
Prci9g1193 555 Gene3D - 357 393 - -
Prci9g1193 555 SUPERFAMILY Ubiquitin-like 19 71 IPR029071 -
Prci9g1193 555 Gene3D - 2 76 - -
Prci9g1193 555 MobiDBLite consensus disorder prediction 459 484 - -
Prci9g1193 555 CDD UBA 359 388 - -
Prci9g1193 555 Coils Coil 315 342 - -
Prci9g1193 555 SMART uba_6 283 320 IPR015940 -
Prci9g1193 555 SMART uba_6 355 392 IPR015940 -
Prci9g1193 555 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 3 546 IPR039749 -
Prci9g1193 555 Gene3D - 259 334 - -
Prci9g1193 555 SUPERFAMILY UBA-like 351 394 IPR009060 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1193 - - aip:107630532 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1193 9 25926085 25931123 Prci9g1193 9 25926085 25931123 ECH