Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0892 ATGTCCACCGCCGAAGCCACCGAGAACGGTGCCACCACGGCGCCAGAGCCCCAGCCACCTGTGGTCGCATCGGACAATGCCTCCACCGCCGTCTTAGCCACCGCTGACACCACCAACACCAAGGCTGCTACTGATGTGAACGCCACCCAGGGTAACCCATCGAATGAGGAACCCGAGTCCGAGCTTCCTAAGGCAGATGAAGCTTCCGCCGATCAGCCCTCTGCTACAACCACCAACACCGCCACTCCACCTGAGAAGAGGTGGCCGGGTTGGCCTGGGGATTGCGTGTTCCGGCTCATTGTGCCGGTCCTCAAGGTAGGTAGTATTATCGGCCGGAAGGGAGAGCTCATTAAAAGGATGTGCGAGGAGACTCGAGCGCGCATTCGCGTTCTCGATGGTGCCGTTGGCACTCCGGATCGAATTGTACTCATATCAGGGAAGGAAGAGCCAGAGGCACCTCTTTCCCCTGCAATGGATGCTGCAATAAGGGTATTTAAGCGTGTCTATGGATTATCTGAAGGTGATGGTGAGAGTAAAGCATCAGCACCTGCTGCTGTTGCATACGTTTCTGTTCGTCTGTTGGTGGCATCAACACAGGCTATCAATTTGATTGGAAAGCAAGGTTCATTAATTAAATCTATACAGGAGAGTACTGGTGCTTCTGCTCGTGTATTGTCTGGAGATGAGGTGCCATTTTATGCTGCTGCGGATGAGAGGATTGTAGAGTTGCAGGGAGAAGCCTTGAAGGTCCTTAAGGCTCTGGAAGCAGTAGTTGGCCACCTACGAAAGTTCTTGGTTGATCATAGTGTTCTTCCCCTTTTTGAGAAAAAAACTTACAATGCAACAACCTCACAAGACCGCCAAGCAGATGCCTGGGCTGACAAGACGTCTCTGCATAGTGCTTCACAAACTAGCATTAGTGCAGATGTTCCTCTTTCAAGCAAAAGGGATTCTCTCTTTGTTGAACGTGAAATTCATTTGGATTCACAACTCCCATCCTCTGCAATGTCACTCTATGGGCAAGATTCTTCACTTTCTGGTGTTCGTTCTTCAACACTTGGTCGTGCCGGGGCTCCCATTGTTACCAATGTGATACAAACAATGCAAATACCACTATCCTATGCTGAAGACATCATTGGGATTCAAGGGACTAATATTGCTTACATTCGCCGTACTAGTGGAGCCATACTGACTGTGCAAGAGAGCAGGGTGCCTGATGAAATTATTGTTGAAATTAAAGGCACCACAACACAAGTTCAGTTGGCACAGCAGTTGATTCAGGAAGTGATAAGCAATCACAAAGAACCAGCCTCTAGCAGTTACGGTAGGTTAGATAGTGGTGGTCTGAGGTCTTCATATGCTCAGTTGGGCGGCGGTACATCCTACTCATCTTCTTCAGCGTCCGCACAGCCCTACACAGGTTATGGCTCTTCTGGTTTAGGAGGCTATAGTACTTTTAGACTCTGA 1467 0.4956 MSTAEATENGATTAPEPQPPVVASDNASTAVLATADTTNTKAATDVNATQGNPSNEEPESELPKADEASADQPSATTTNTATPPEKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKRMCEETRARIRVLDGAVGTPDRIVLISGKEEPEAPLSPAMDAAIRVFKRVYGLSEGDGESKASAPAAVAYVSVRLLVASTQAINLIGKQGSLIKSIQESTGASARVLSGDEVPFYAAADERIVELQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKKTYNATTSQDRQADAWADKTSLHSASQTSISADVPLSSKRDSLFVEREIHLDSQLPSSAMSLYGQDSSLSGVRSSTLGRAGAPIVTNVIQTMQIPLSYAEDIIGIQGTNIAYIRRTSGAILTVQESRVPDEIIVEIKGTTTQVQLAQQLIQEVISNHKEPASSSYGRLDSGGLRSSYAQLGGGTSYSSSSASAQPYTGYGSSGLGGYSTFRL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0892 488 ProSiteProfiles Type-1 KH domain profile. 94 161 - -
Prci9g0892 488 Gene3D K Homology domain, type 1 362 460 IPR036612 GO:0003723
Prci9g0892 488 ProSiteProfiles Type-1 KH domain profile. 188 257 - -
Prci9g0892 488 ProSiteProfiles Type-1 KH domain profile. 363 426 - -
Prci9g0892 488 SMART kh_6 362 431 IPR004087 GO:0003676
Prci9g0892 488 SMART kh_6 93 166 IPR004087 GO:0003676
Prci9g0892 488 SMART kh_6 187 262 IPR004087 GO:0003676
Prci9g0892 488 CDD KH-I_PEPPER_rpt1_like 94 160 - -
Prci9g0892 488 CDD KH-I_PEPPER_rpt2_like 190 262 - -
Prci9g0892 488 MobiDBLite consensus disorder prediction 70 84 - -
Prci9g0892 488 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 185 269 IPR036612 GO:0003723
Prci9g0892 488 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 87 149 IPR036612 GO:0003723
Prci9g0892 488 Pfam KH domain 366 428 IPR004088 GO:0003723
Prci9g0892 488 Pfam KH domain 97 149 IPR004088 GO:0003723
Prci9g0892 488 Pfam KH domain 191 257 IPR004088 GO:0003723
Prci9g0892 488 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 360 432 IPR036612 GO:0003723
Prci9g0892 488 MobiDBLite consensus disorder prediction 1 89 - -
Prci9g0892 488 MobiDBLite consensus disorder prediction 22 57 - -
Prci9g0892 488 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 83 451 - -
Prci9g0892 488 Gene3D - 94 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0892 Prci-Chr9 23607270 23612786 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0892 K21444 - qsa:O6P43_022369 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g0892 9 23607270 23612786 Prci9g0892 9 23607270 23612786 ECH