Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0886 ATGCGCTCAGGAGGTTGTGCATTACAGCAGACCCTCACATCGGAGGCTGCATCTGTGTTGAAGCATTCTCTGGGCTTGGCTCGCAGGAGGGGCCATGCCCAGGTCACTCCACTCCACGTGGCAGCCACCTTGCTCAGCCTTAGAGCCAGCTCCTTCAGAAGGGCTTGTCTCAAATCTCACCCTCATCATCAAACTTCTCCGCATTCACATCATACTCTCCACTGCAGAGCCCTTGAGCTCTGCTTCAATGTGGCTCTCAACAGGCTCCCAACCACACCAACTCCAAATCTGCTTCACACCCAGCAGCCTTCTCTGTCAAATGCCCTCATTGCTGCTCTCAAAAGAGCTCAGGCTCACCAGAGAAGGGGTTGTATAGAACAACAGAATCAGCAGCCACTTTTGACCATAAAGGTAGAGCTTGAACAGCTGGTTATATCTATTCTTGATGACCCTAGTGTTAGCAGGGTTATGAGGGAGGCTGGGTTCTCTAGTACTGCTGTGAAGAGCAGTATAGAGGACTCTTCAGTTTCAACTCCTTGTTCCGTTTTCCAGTGTTACGGAACTTCTGGAGGTGTCTTTTCTTCTCCTTGTTCTCCTTCTCCTAGTGAAAACCAGAGAGAAACCATCAATTCCAACAGTTTCAGACAGGCCCACTTCTACGCTACTCCTGAGTACTACAACAAAGTTCTTTTCTCTCCTCAGAAGAGAACCCCAGTGTACCCCATCACTGAACCAGCTTCATCTAGGGAAGACATCAGGTTGGTTTTGGATGTGCTCTTGAGGAAGAAGAAGAAGAACGCTGTGATAGTTGGGGATTCTGTGTCCATCACTGAAGGCCTCGTGGGACAGTTGATGGGAAGACTAGACAAAGGAGAGGTCCCTGATGAGTTGAAGTCAACTCGTTTCATCAAGTTCCTTCCAGCACCAGTTTCCTTGAGGTTTATGAAGAGAGATGAAGTTGAAATGAACCTACTGGAGCTGAAAAGAAAGGTGGATTCCACTGCATCAGGAGGAGGTGGTGCCATTATTTACATTGGAGATCTGAAATGGACAGTGGAGGCAACTTTCTTTAGCGAAAAAGAGGAGGGAGGAGAAGCATCTGGATATAACCCAGTGGATCATCTAATTGCAGAAATAGGAAAGTTGTTCTCTGACCACGGAAGCTCGTCAGGCGCTAAGGCATGGTTGATGGCCACTGCAAGTTACCAAACATACATGAGATGTCAAATGAGGCAGCCTGCTCTCGAGACCCAGTGGTCTTTTCAGGCAGTTCTTGTTCCTTCAGGTGGACTTGGCTTGAGTCTTCATGCTTCCAGTGTTCTTGAGTCAAAAATGACCAATCCCCAGAACCCATCTCAAATGCTGGAAAAGAATCTCTTCAGTTATAGGGAGGAGCAGGATAAGCTCACTTGCTGTCAAGAATGTGCCTCTAACTATGAAAAGGATGCTCAAATGTTCAAGCCAGGCCAGCCCAAACTCATGCCTTCATGGCTTCAGTCTCATAGCATTGAAGCCCATCACAAGGAGGAATTAACCGAGTTGAGAAGAAAATGGAATAGACTATGTCAGTATCTTCACCAAAGCAAGCATTCCCACAACCATTGGAACAACAGTTTATACACCAATCACAGTCCAAACGGGAAGATTTATCCCTACAATTCTTCATATCCCTTGTGGTCAAAGCAAGGAAGTATTTTCCCAGATTCAAGCTGTATATCATTTGCAGATTCTGCTGTTAAATCCACTCATAGCTCTAATCTTGTACCTCGATTCCGACGCCAACAATCATGCACTATTGAGTTAAATTTTAGCAATGGAACTCAGAAACAGCAGCAAGCAGCAGCAGAAGAACCAAGCTTGGATTCTCTCAAGGGCATGGAAGGTAAAGAAGTAAAGATTACTCTTGCTCTAGGGAATTCCCAATTCGGTGGTTCAGAGCAAAGGGAGGAAAATACAACTGATACAACACAGCGAGGAGCTCATGTTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAGTCTGAAACAATCCCTTCAATAGCAGAGTCTTTATTTGTTGACTACCAATCAAAAAAGCAAAACGCAGCTTGGTTGATTTTGCAGGGCAACGACTCTGTAGGGAAAATAAGGTTGGGTCGCGCAATTGCCGAATCGTTCTTCGGCTCAGATGATCTGCTTTTTCAACTGGACATGAAGAAAAACAAGAACTTAGCATCTCCGTTCTCTGAAATGCTGAGGAGAGCTTTGGAAGCGCATAAAGAACTCGTTGTCTTAATCGAAAACATTAATTTCGCCGACACCGATTTCAAAAAATTCCTCGCGGATATTTATGAAACAGGAAAGTTCGGCCGAGCAATATTCATGGTGACGACAGGTGGCTCAACGATAAACGAAGAACAGGATCATGACTCAGTGATGCAATTAACATTGCAGGTCAGCGAAAACAATCCAAACTCGGAGACACATTGCGTCGTGGGCCAAAAGCGAAAAGCAGAATTCGATCTGTTCGCGAAAATAAAAAACCCAAGAGCCGAAGAGAAAGAAGAGGAATCGAACAAAAAGAAGGACTTCTCGAGACAGTCAAGCTTCAACACCCTTGATCTGAACATGAAAGCCAACGAAGACGACGACGAAGACGGTGAAGGAGAGAGTAGCGGTAGCCCCATTTCAAGCGATTTGACCCGAGAAACAATGCCCGATCCCGCAGACCCAAATGGGTTTCTGGAGTCAATCAAGAAGCAATTCGAGTTGAACCGAAGTCCAGCTCGAGAGAGAGAAATCGCTGAGCTATTCTCATCGAAAATCAAAGGGAGCTTTGAAGAACTTCACGGGAAGCAAAATGGGAGGAGTTTCAGTATAGAAGAGAAGGTGATAGAGGAAATAGCAGGTGGGTGTGGTAGTTTTACTAACAGTGTGTTTGAGAAATGGCTAAAAGACATTTTTCAAAAAAGCTTAGAAACAGGAAAGGAGAAAGAGGGTATAGGTTTTAGACTTTGTTGGGGTGGTAAAGGTAGAGGAGGCGAAATTAGGGTTTTGGATAGTGGAGAAGGCGGTGGATTCATGGGTTCATGTCTGCCCAAAAGCATCAAAGTTAACTACTTGATGGATTGA 3111 0.4539 MRSGGCALQQTLTSEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSFRRACLKSHPHHQTSPHSHHTLHCRALELCFNVALNRLPTTPTPNLLHTQQPSLSNALIAALKRAQAHQRRGCIEQQNQQPLLTIKVELEQLVISILDDPSVSRVMREAGFSSTAVKSSIEDSSVSTPCSVFQCYGTSGGVFSSPCSPSPSENQRETINSNSFRQAHFYATPEYYNKVLFSPQKRTPVYPITEPASSREDIRLVLDVLLRKKKKNAVIVGDSVSITEGLVGQLMGRLDKGEVPDELKSTRFIKFLPAPVSLRFMKRDEVEMNLLELKRKVDSTASGGGGAIIYIGDLKWTVEATFFSEKEEGGEASGYNPVDHLIAEIGKLFSDHGSSSGAKAWLMATASYQTYMRCQMRQPALETQWSFQAVLVPSGGLGLSLHASSVLESKMTNPQNPSQMLEKNLFSYREEQDKLTCCQECASNYEKDAQMFKPGQPKLMPSWLQSHSIEAHHKEELTELRRKWNRLCQYLHQSKHSHNHWNNSLYTNHSPNGKIYPYNSSYPLWSKQGSIFPDSSCISFADSAVKSTHSSNLVPRFRRQQSCTIELNFSNGTQKQQQAAAEEPSLDSLKGMEGKEVKITLALGNSQFGGSEQREENTTDTTQRGAHVCKLLQENVPWQSETIPSIAESLFVDYQSKKQNAAWLILQGNDSVGKIRLGRAIAESFFGSDDLLFQLDMKKNKNLASPFSEMLRRALEAHKELVVLIENINFADTDFKKFLADIYETGKFGRAIFMVTTGGSTINEEQDHDSVMQLTLQVSENNPNSETHCVVGQKRKAEFDLFAKIKNPRAEEKEEESNKKKDFSRQSSFNTLDLNMKANEDDDEDGEGESSGSPISSDLTRETMPDPADPNGFLESIKKQFELNRSPAREREIAELFSSKIKGSFEELHGKQNGRSFSIEEKVIEEIAGGCGSFTNSVFEKWLKDIFQKSLETGKEKEGIGFRLCWGGKGRGGEIRVLDSGEGGGFMGSCLPKSIKVNYLMD 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0886 1036 Gene3D - 642 859 IPR027417 -
Prci9g0886 1036 SUPERFAMILY Double Clp-N motif 12 172 IPR036628 -
Prci9g0886 1036 MobiDBLite consensus disorder prediction 842 907 - -
Prci9g0886 1036 Gene3D - 240 428 IPR027417 -
Prci9g0886 1036 ProSiteProfiles Clp repeat (R) domain profile. 8 177 IPR004176 -
Prci9g0886 1036 Gene3D - 9 175 IPR036628 -
Prci9g0886 1036 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Prci9g0886 1036 Pfam Clp amino terminal domain, pathogenicity island component 138 173 IPR004176 -
Prci9g0886 1036 MobiDBLite consensus disorder prediction 842 857 - -
Prci9g0886 1036 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 989 - -
Prci9g0886 1036 FunFam protein SUPPRESSOR OF MAX2 1 9 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0886 Prci-Chr9 23515675 23519390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0886 - - gmx:102660146 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g0886 9 23515675 23519390 Prci9g0886 9 23515675 23519390 ECH