Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0860 ATGACCAACAGCAACCATAACCACGTCATGATCAAATCCTCCGTCCTCCTCCTCCTCCTCAGCTTCCTCGTTGCCGCTGCCTCCTCCGGAAACTTCAACCAGGACTTCCAAATCACCTGGGGCGACGGCCGCGCCACCGTCCTCGACGGCGGCCGCCTCCTCACCCTCTCTCTCGACAAGTCCTCCGGCTCCGGCTTCCGCTCCGTCAACCAATACCTCTTCGCAAAGATCGACATGCAGCTCAAACTCGTCCCCGGAAACTCCGCCGGCACCGTCACCACTTACTACTTAAGTTCAGAGGGGCCAACTCATGACGAAATAGACTTTGAATTTCTGGGAAATTTGAGTGGCGATCCTTATATTCTTCATACCAACATATACGCGCAAGGGAAAGGTAACAGAGAGCAGCAGTTTTATTTGTGGTTTGATCCCACCAAAGACTTTCACACTTATTCCATTCTCTGGAATCCTCAAACCATCATATTCTCAGTGGACGGCACACCAATAAGAGAATTCAAGAACATGGAATCAAGAGGGATTCCATTTCCAAAGAGCCAAGCAATGAGACTATACGGAAGCCTCTGGGACGCAGAAGATTGGGCCACCAGAGGAGGACTTGTGAAGACTGATTGGACCAAAGCTCCTTTCACTGCCTCTTTCAGGAACTTCAATGCTCAAGCCTGTGTTTCTTCGGCGTCGTCTTCTTCTTCCTCCTGCAACAGCGGCGGCTCGTCGGACCAGTCGTGGCTGAAACAGTCGCTGGACTCGACCGGACAAGCCAGAATCAAGTGGGTGCAGAAGAATTACATGATTTATAACTATTGTACTGATACCAAGCGATTCCCTCAAGGCCTCCCTCCTGAATGCTCTCTCTGA 876 0.5114 MTNSNHNHVMIKSSVLLLLLSFLVAAASSGNFNQDFQITWGDGRATVLDGGRLLTLSLDKSSGSGFRSVNQYLFAKIDMQLKLVPGNSAGTVTTYYLSSEGPTHDEIDFEFLGNLSGDPYILHTNIYAQGKGNREQQFYLWFDPTKDFHTYSILWNPQTIIFSVDGTPIREFKNMESRGIPFPKSQAMRLYGSLWDAEDWATRGGLVKTDWTKAPFTASFRNFNAQACVSSASSSSSSCNSGGSSDQSWLKQSLDSTGQARIKWVQKNYMIYNYCTDTKRFPQGLPPECSL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0860 291 FunFam Xyloglucan endotransglucosylase/hydrolase 19 291 - -
Prci9g0860 291 Gene3D - 20 291 - -
Prci9g0860 291 Pfam Glycosyl hydrolases family 16 33 213 IPR000757 GO:0004553|GO:0005975
Prci9g0860 291 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 25 289 IPR044791 GO:0004553
Prci9g0860 291 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 245 289 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Prci9g0860 291 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 290 IPR013320 -
Prci9g0860 291 ProSitePatterns Glycosyl hydrolases family 16 active sites. 106 116 IPR008263 GO:0004553|GO:0005975
Prci9g0860 291 CDD GH16_XET 28 289 IPR016455 GO:0010411|GO:0016762|GO:0042546
Prci9g0860 291 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 26 220 IPR000757 GO:0004553|GO:0005975
Prci9g0860 291 PIRSF EndGlu_transf 1 291 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0860 Prci-Chr9 23160693 23162771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0860 15 289 Glycoside Hydrolase AT4G25810 72.000 6.88e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0860 K14504 - qsu:112034223 470.314