Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0839 ATGTCCAGGCTGCTTCGTAAAACCTACCTTCTGCGGAGCTCTCTTTTCGGCAATGACGTTACTACGATGGGCTATAGACATGGATTATTGGGCACGTCGCAAATTTTAAGCTTCTCAACTCGAGGTAAAAGGGGGTCAAAATCAGATGGAAGTTGTTCACGCGAAGAAAATATGTCCAAGAAAGAGTTGGCCATACAACAAGCTCTGGATCAGATCATTTCTGCACATGGAAAGGGATCTATTATGTGGCTCGGTCGCTCTGTCTCTGAAAAACATGTATCTGTACCTGTAGTGCCGACTGGTTCTTTTGCTCTTGATATAGCACTAGGAGTTGGTGGGCTTCCAAAGGGACGTGTTGTGGAAATATACGGTCCAGAGGCTTCTGGTAAAACTACTCTGGCCTTACATGTGATTGCAGAAGCGCAGAAGCAAGGAGGCTATTGTGCGTTTATTGATGCCGAGCATTCACTTGATAGAACACTCGCAGAGTCCATTGGTGTAAATACTCAGAACTTGCTTCTCTCTCAACCTGATTGTGGTGAACAAGCACTTAGTCTTGTTGATACCTTAATTCGAAGTGGTTCAGTTGATGTAATTGTTGTTGACAGTGTGGCTGCTCTTGTTCCTAAAGGTGAGCTTGATGGTGATATGGGTGATGCTCACATGGCAATGCAGGCTAGGTTGATGAGCCAGGCACTTCGAAAATTGTGCCACTCTTTGTCAATGTCCCATTGTATATTGATTTTTATAAACCAGGTGAGGTCAAAGCTTTCTACTTTCGGGGGGTTTGGTGGGCCAACTGATGTTACTTGTGGTGGCAATGCATTGAAATTCTATGCTTCAGTGCGGCTAAATATCAAGCGAACAGCATTTGTTAAGAAGGGAGAAGAGACTTTAGGAAGCCAGCTCCTTGTCAAGGTTGTGAAGAACAAGCTTGCCCCTCCATTTAAAACTGCACAGTTTGAGCTTGAGTTTGGCAAGGGCATAAGCAGAGAAGCAGAGATCATAGATCTGAGCTTAAAACATAAGTTTATCTCCAAGTCTTGTTCATTTTTCAACTACAATGGCCAGAACTTCCATGGTAAGGATGCTCTTAAGAAGTTCCTGGCTGGCAACCCTAGTGAACTAGAAGAACTTACTCTGAAGCTGAGGGAGAAACTTCTTACTGCTGAGAAAGAAGCAGGGGTGACAGATGGAGATGTTACAGAAGTTGCGTCACCTTATTCTACTGATGAAGAAGCTGCTGCTGCAGAAGTATGA 1260 0.4413 MSRLLRKTYLLRSSLFGNDVTTMGYRHGLLGTSQILSFSTRGKRGSKSDGSCSREENMSKKELAIQQALDQIISAHGKGSIMWLGRSVSEKHVSVPVVPTGSFALDIALGVGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHSLDRTLAESIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGDMGDAHMAMQARLMSQALRKLCHSLSMSHCILIFINQVRSKLSTFGGFGGPTDVTCGGNALKFYASVRLNIKRTAFVKKGEETLGSQLLVKVVKNKLAPPFKTAQFELEFGKGISREAEIIDLSLKHKFISKSCSFFNYNGQNFHGKDALKKFLAGNPSELEELTLKLREKLLTAEKEAGVTDGDVTEVASPYSTDEEAAAAEV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0839 419 Hamap Protein RecA [recA]. 61 390 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 PRINTS RecA protein signature 272 300 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 PRINTS RecA protein signature 305 334 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 PRINTS RecA protein signature 186 215 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 PRINTS RecA protein signature 358 375 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 PRINTS RecA protein signature 224 253 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 PRINTS RecA protein signature 152 181 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 ProSiteProfiles RecA family profile 1. 94 253 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Prci9g0839 419 Pfam recA bacterial DNA recombination protein 64 330 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 NCBIfam recombinase RecA 61 385 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 ProSitePatterns recA signature. 275 283 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Prci9g0839 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 329 IPR027417 -
Prci9g0839 419 Gene3D - 93 391 IPR027417 -
Prci9g0839 419 SMART AAA_5 116 290 IPR003593 GO:0016887
Prci9g0839 419 FunFam Recombinase RecA 92 391 - -
Prci9g0839 419 CDD RecA 95 331 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci9g0839 419 ProSiteProfiles RecA family profile 2. 263 334 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Prci9g0839 419 SUPERFAMILY RecA protein, C-terminal domain 330 386 IPR023400 -
Prci9g0839 419 MobiDBLite consensus disorder prediction 398 419 - -
Prci9g0839 419 PANTHER RECA 38 394 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0839 Prci-Chr9 22998428 23004174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0839 K03553 - gmx:100798983 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g0839 9 22998428 23004174 Prci9g0839 9 22998428 23004174 ECH