Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1484 ATGGACGCAGCAGTACTAGGAGCCTTTCTCTCTCCGACCTTCCAGACCATACTAGACATTATCACCTCAAGTAAATTTCGAGATTTTGTTGAGGATAGAAACCTGAATGTTTCACTCTTGGATGAGCTGAAGATAACTCTCATTATCCTTGATGCTATTCTCAATGATGCTGAAGAGAAGCAAATCACTAGCCCTGCTGTCAAGAAATGGCTTGAAGAGTTGAAAGATGCCGCTTATGATGCAGAGGATTTATTAGATGAAATCAACACTGACTCTCTCAGATGGCAGGTGGAACAAGATTCTGATGAAGGCGTTGCTGATAAGGTGCATTCTTTCCTTTCTTATACTTTTGGTGATTGCTACTGGGACATGAACATGAAGCTTGAAGCAATTTACCGAAGGCTTAAACACTTCGCTGAACAAAAGGATTTCCCTCATTTGCAAAGTGTTAGCCGGAGGGCTCATAAAACAACTGCTACTTCATTAATAAATGAATCTGTTGTAGTTGGTAGAGAGGATGATAAGGAGAAACTGTTGAAAATGCTTGTGCGTGATGAAAATGCAGAGGGTAATGATATAGGAGTGATCACTATCTGGGGCATGGGTGGGGTAGGTAAAACTACCCTTGCTCAACTCCTTTACAATGATGAGGAAGTGCAGAAGCATTTTGATTTGAAGGCTTGGGCATGTGTTTCAGAAGATTTCAATGCCTTTGAGGTGACCAAGAATATTCTAGAATCTGTCACTTCAAAAGCCTATAATAGTAAAAATCTAGATTTCCTTCGAGTTGAACTGAAAAATAGCTTGAAGGATAACAAGTTTTTGATTGTATTTGATGATATATGGAATGAGAAATATAGTGATTGGGATGATCTAGTTTCTCCTTTTCGCAATGGAAAAGGGGGAAGTAAAATCATTGTCACAACTCGCCAACAAAGAGTTGTTGAAATCACACATACATTTCCTCCGTATAAATTGTCAACTCTCTCAAATGAAAATTGTTGGTTTTTAATTGCCAAGCATGCCCTTAAAATTGAGGATCATAAGAAGCATCCAAAGCTAGAAGCAATTGGAAGGAAAATTGCAAGGAAATGTTGTGGTCTACCAATTGCTGCTAGATCAATTGGAGGTCTCTTGCGTTCAAAAGCGGATGAAAAGGAATGGTGTAAAATTCTAAATAGTAATGTGTGGGACATACCAAGTGACGATGTTTTACCTTCTTTATATTTGAGTTATGTTTATCTTCCGCCACATTTAAAGAAATGTTTTGCTTTTTGCTCAATTTTTCCAAAAGATCACTTATTGGATAGGAAGCAATTGGTCTTGTTATGGATGGCTGAAGGTTTTGTACAACAATACTCCCAAGGGAAGATATTGGAGATAGAATCAGATAACTGCTTTAATGAATTACTATCTAGATCCTTCATTCAACAGCATGAAGGAGCATAG 1449 0.3803 MDAAVLGAFLSPTFQTILDIITSSKFRDFVEDRNLNVSLLDELKITLIILDAILNDAEEKQITSPAVKKWLEELKDAAYDAEDLLDEINTDSLRWQVEQDSDEGVADKVHSFLSYTFGDCYWDMNMKLEAIYRRLKHFAEQKDFPHLQSVSRRAHKTTATSLINESVVVGREDDKEKLLKMLVRDENAEGNDIGVITIWGMGGVGKTTLAQLLYNDEEVQKHFDLKAWACVSEDFNAFEVTKNILESVTSKAYNSKNLDFLRVELKNSLKDNKFLIVFDDIWNEKYSDWDDLVSPFRNGKGGSKIIVTTRQQRVVEITHTFPPYKLSTLSNENCWFLIAKHALKIEDHKKHPKLEAIGRKIARKCCGLPIAARSIGGLLRSKADEKEWCKILNSNVWDIPSDDVLPSLYLSYVYLPPHLKKCFAFCSIFPKDHLLDRKQLVLLWMAEGFVQQYSQGKILEIESDNCFNELLSRSFIQQHEGA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1484 482 Pfam Rx N-terminal domain 39 101 IPR041118 -
Prci8g1484 482 Coils Coil 67 91 - -
Prci8g1484 482 Gene3D - 38 119 - -
Prci8g1484 482 FunFam Probable disease resistance protein At1g61300 150 320 - -
Prci8g1484 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 426 IPR027417 -
Prci8g1484 482 Gene3D - 412 482 IPR036388 -
Prci8g1484 482 Gene3D - 124 320 IPR027417 -
Prci8g1484 482 PANTHER DISEASE RESISTANCE PROTEIN RP 68 477 IPR044974 GO:0006952
Prci8g1484 482 PRINTS Disease resistance protein signature 195 210 - -
Prci8g1484 482 PRINTS Disease resistance protein signature 268 282 - -
Prci8g1484 482 PRINTS Disease resistance protein signature 365 379 - -
Prci8g1484 482 Gene3D - 328 411 IPR042197 -
Prci8g1484 482 Coils Coil 40 60 - -
Prci8g1484 482 Pfam NB-ARC domain 171 393 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1484 Prci-Chr8 11806341 11808647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1484 168 344 WRKY Transcription Factor Family AT4G12020 25.628 1.21e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1484 - - pcin:129317301 808.135