Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1139 ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGCCCTTCCAAGGCCTATCTCGCCCACCGTTCCGGCGAATCTCCGGCTCCCGCTCAGCCCGACCTCCGCCGCAGCCTTCGCCGACGAAATGTGAGGTACAACATCGAGTATGACGACTACCTTGACGAGGACGACGAGGACGAGGACGAGGACGAGAGGAGGAGGGAGAAGAAGCTGAAGCTAGTTGTGAAGCTTAACCAGGATAGGGATAGGGACGAAGAAGAGTCGGCGCCCAGCCGCACGCGCGGTGGGGCGCGTGGGAGTCACTCGCGGGACTCTTCGGAGGAGGACGAGGGTGAAAGGAAGCCCTTGAAGAAGAGGAGGATTAACGGCGGCAGGGTTGGGAATGAAGACGGCGAGGAGGAGGACGAGGAGGAGGAAGGAGGGGATGATAATGATGAAGAAAACGAAAACGAGGAAGACGAGAATCTCCGTGACCATAATGATGATGATGATGATGGCGTGGTAAAAGGCAGAAAAGTGGATTCGAAAGGGCTCCACTCTGTTTCAGGGACTCCGAGAAAATCTTCATCTGGAATTCCGTTACCTGATAAGAGGACATTAGAGTTGATCCTCGACAAACTTCAGAAGAAGGACACATACGGTGTGTATGCGGAACCTGTTGATCCGGAAGAGCTTCCTGATTATCACGATGTGATTGAGAATCCAATGGACTTTGCCACAGTACGAAAGAAGCTTGCTAATGGATCATATCCCACGTTAGAACAATTTGAGAGTGATGTATTTTTAATATGCACAAATGCAATGCAATACAATTCGGCGGAAACTATATACCACAAACAGGCACGATCAATACAAGAATTAGCTCGGAAGAAGTTTGAGAAGTTAAGGGTTGACTTTGAACACTCACAAGGTGAGCTGAAATCAGACCAAAAAGCGAGATCAAATTCCTTGGGCAAGAAGCAGACAAAGAAGCCAGTTGGTCATTCCTCACAGGAACCTGTTGGCTCTGATTTCTCTGCCGGCGCGACTCTCGCTAACATTGGAGATGTGCTGCCAACTTCACACCCTATCCCAGGTGGCATGTTTGAGAGGCCTTCCAACAATGATGCCCTTGCCGATGGTAATGGTTTCTTAATTGATGCAAATCAAGAAAAAGCAGATGATGTTTTATCAGGGAAGAACCTTCTCTCTAAGTTGGGAAGAAAGCCATTTGGTCTTGATGATAATCGTCGTGGAACTTATAATGCCTTTATGCAACCTGTCACCAAATCAGATTCTGTTCTTATGACATTTGAAAGTGAAATTAAGCAGCTGGTTACCGTTGGTCTTCATGCTGAATATTCCTATTCTAGGAGTTTAGCTCGTTTTGCTGCTACTTTAGGGCCTGTTGCTTGGAAAATGGCTTCCCGGAGAATTCAGCGGGCACTTCCAAGTGACTGTAAATTTGGTCGCGGTTGGGTTGGAGAGTATGAACCACTTCCAACACCAGTAATAATGCTTGATAATCGAATCCATAAAGAACCTAGTTTTGTTACAAAGTTTCAGTCTACTACTGAATCTGGAAAGGGTGACAAAAATGGCAGGATTTCAGAATCCTCAGTGGATGATAAGGTTCATGGACTCATGTTAGAGGGGAAACAGCCTTCTGTTGATCCTACTAGTAGACCTGCCTCAGAGGGAAAACCATCTCTGTTTAGTTCTGCTGGAATAAGACCCAATGCTCCAGTAAATGTCCTTTATCAGCAACAGAATGTTCAACCCGGGAGTTCTGGCAAGCCTGAGAATAAGGGTTTGAAACAGGTGGAGTTGAACTCCTTGCCCTCTAGTAATCAGAATAATGCCAATCTCAGTGCGAAGTTTTTAAACAATGCGTCACCAGGAGTGTCTAAGCCCAGAGAGATGGTACCTAGGAACATGACTATAGTGCCACCTGTACCTTTCAAGGAGCTAGATAATAACGGAGTTGCAAGTGGAGATTTACCTAATGGAAAAGTCACAAGTTCTAGTATGAATAGACGGGCAATGGGACCTCCCTCTGAAAGCACGTCAAATCAAACTGGCAGAGTTGCTCCTTTTGTGCCCCATGGGCAAGATCAGAATCTTACTGACCCAGTTCAGCTGATGAGGATGTTAGCTGAAAAGGCTCAGAAGCAACAAGCTTCTTCTAATCCTTCTCCCGTTGATACTCCTCCTATGACACCATCAGTTTCATCAGGACGGAGGGATGACTTGAGCAATGCTGCTGCAGCAGCTGCTCGTGCATGGATGTCTGTGGGAGCAGGTGGATTTAAGCAAGGAACTGATAATTCAAGTTCACCCAAAAACCAGATTTCCGCAGATTCTTTATACAACCCATCGCGAGAGTTCCACCAACATATTCCACGAACAAGGGGAGAGTTCCCTTCTGGTGGAATGCCTTTCCAGCCTGAGAAGAACAACTTTCCATTTCAGGCACTAGCATCTCAACCAATTCACCCAGGCAGTGTTTCACAGTTTCCTAATCGGCCTATGGTTTTCCCTCAACTAGCAGCTACTGATTTATCCAGATTTCAAATACAATCTGCTTGGCAAGGTCTCAGTCCGCATGGCCAACCAAGGCAAAAATCAGAAACACTCCCTCCTGACTTGAATATTGGCTTCCAATCTCCAGGGTCACCTGCAAAACAATCTTCTGGTGTGATGGTTGATTCGCAGCAACCAGACCTGGCTCTACAACTATGA 2718 0.4684 MGQIVRRKKKGRPSKAYLAHRSGESPAPAQPDLRRSLRRRNVRYNIEYDDYLDEDDEDEDEDERRREKKLKLVVKLNQDRDRDEEESAPSRTRGGARGSHSRDSSEEDEGERKPLKKRRINGGRVGNEDGEEEDEEEEGGDDNDEENENEEDENLRDHNDDDDDGVVKGRKVDSKGLHSVSGTPRKSSSGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFATVRKKLANGSYPTLEQFESDVFLICTNAMQYNSAETIYHKQARSIQELARKKFEKLRVDFEHSQGELKSDQKARSNSLGKKQTKKPVGHSSQEPVGSDFSAGATLANIGDVLPTSHPIPGGMFERPSNNDALADGNGFLIDANQEKADDVLSGKNLLSKLGRKPFGLDDNRRGTYNAFMQPVTKSDSVLMTFESEIKQLVTVGLHAEYSYSRSLARFAATLGPVAWKMASRRIQRALPSDCKFGRGWVGEYEPLPTPVIMLDNRIHKEPSFVTKFQSTTESGKGDKNGRISESSVDDKVHGLMLEGKQPSVDPTSRPASEGKPSLFSSAGIRPNAPVNVLYQQQNVQPGSSGKPENKGLKQVELNSLPSSNQNNANLSAKFLNNASPGVSKPREMVPRNMTIVPPVPFKELDNNGVASGDLPNGKVTSSSMNRRAMGPPSESTSNQTGRVAPFVPHGQDQNLTDPVQLMRMLAEKAQKQQASSNPSPVDTPPMTPSVSSGRRDDLSNAAAAAARAWMSVGAGGFKQGTDNSSSPKNQISADSLYNPSREFHQHIPRTRGEFPSGGMPFQPEKNNFPFQALASQPIHPGSVSQFPNRPMVFPQLAATDLSRFQIQSAWQGLSPHGQPRQKSETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1139 905 MobiDBLite consensus disorder prediction 523 541 - -
Prci8g1139 905 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 904 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 318 336 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 160 175 - -
Prci8g1139 905 SUPERFAMILY Bromodomain 181 294 IPR036427 GO:0005515
Prci8g1139 905 ProSiteProfiles Bromodomain profile. 207 277 IPR001487 GO:0005515
Prci8g1139 905 Gene3D - 194 315 IPR036427 GO:0005515
Prci8g1139 905 MobiDBLite consensus disorder prediction 658 689 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 510 569 - -
Prci8g1139 905 Coils Coil 34 54 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 714 741 - -
Prci8g1139 905 SMART bromo_6 188 296 IPR001487 GO:0005515
Prci8g1139 905 MobiDBLite consensus disorder prediction 793 812 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 302 337 - -
Prci8g1139 905 PRINTS Bromodomain signature 224 240 IPR001487 GO:0005515
Prci8g1139 905 PRINTS Bromodomain signature 240 258 IPR001487 GO:0005515
Prci8g1139 905 PRINTS Bromodomain signature 258 277 IPR001487 GO:0005515
Prci8g1139 905 MobiDBLite consensus disorder prediction 712 747 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 651 697 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 33 48 - -
Prci8g1139 905 Pfam Bromodomain 201 281 IPR001487 GO:0005515
Prci8g1139 905 MobiDBLite consensus disorder prediction 128 159 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 1 193 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 1 16 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 62 127 - -
Prci8g1139 905 MobiDBLite consensus disorder prediction 856 905 - -
Prci8g1139 905 CDD Bromodomain 195 291 - -
Prci8g1139 905 ProSitePatterns Bromodomain signature. 213 269 IPR018359 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1139 Prci-Chr8 7597752 7603324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1139 K22184 - qsa:O6P43_021182 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g1139 8 7597752 7603324 Prci8g1139 8 7597752 7603324 ECH