Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1077 ATGAGTGCTGTTCCAAAGGAGTCAATTGAAGTCATTGCCCAGAGCATTGGCATCACCAATTTGCCCCCTGATGTCGCCCTTGCTCTCGCTCCCGATGTGGAGTATAGGATTCGGGAAATTGTGCAGGAGTCCATAAAATGCATGCGCCACTCAAAGCGAACTATTCTCACGTCGGATGATGTGGAGAGTGCACTTAAATTAAGAAATCTGGAGCCGACATATGGTTTCACTTCTAATGACCCTCTGCGGTTCAAAAGAGCTGCTGGACACAAGGATTTGTTCTATGTTGATGACAAAGATGTTGATTTTAAGGATCTGATCGAAGCACCACTTCCAAAAGCACCTCTTGATGCATCAGTTACCGCTCACTGGCTGGCAATTGAAGGTGTACAGCCTGCAATTCCAGAAAATGCCCCTATTGAAGCTCCCTCTGAGACAAGAAAATCTGACTCTAAGGAAGATGGACTTCCTGTTGATATTAAATTACCTGTTAAACATGTAATTTCAAGAGAGCTTCAGCTTTACTTCAGCAAAATAACTGAGTTGATATTAAACAAGCCAAGCACCATTCTCTTTAATAGAGCATTAATTAGCTTGGCAACAGATTCAGGGCTCCATCCTTTGATTCCTTATTTCTCATACTTTGTTGCTGATAAGGTGGCACGAAATTCAAATAATTTAATTCTTTTATTTGCTTTGATGCGTCTTGTTCGGAGCCTTACGCAAAATCCTCACATACACATAGAGCCTTATTTACATCAACTGATGCCGTCTGTTATGACCTGCCTTGTTGCAAAAAGGTTAGGGAATAGACTATCTGATGATCACTGGGAACTCAGAAACTTCAGCGCAAACCTGGTTGCTTCTATATGCAAAAGATTTGGGCATGTTTATCATAACCTTCAGCCACGTGTGACAAAGACATTGCTTCATGCTTTCTTGGACCCTACAAAATCTCTACCTCAACATTATGGTGCAATCAAAGGGATAGCAGCTCTTGGACCCAACATGGTTCGCATGCTTATACTCCCGAATCTTGAGGCATATCTGCTTCTTCTTGAGCCAGAAATGCTACCTGAGAAGCAAAAAAACGCATTAAAGAGGCATGAAGCATGGCAAGTTTATGGAGCATTGCTGTGTGCAGCAGGCCAATGTATTCATGAAAGGGCCAAAGTATTCAGCCGTATGCTCTCTCCTGCTTCTCCAACTCGTGCTTTTTCAAGAGGCTGTGGAAAAGTCATGACAGCGATGCCAAGCAAACGTAAAGCCAGCACAGACAATCTAATGCAGCAACCTCCACTGAAGAAACTAGCAACAGATGTTTCTGGGGGTTTGATGCCGATGAACTCCTTGCCGGTTGACATGCAAGGCACACCCGGTGGATTTTCTGCTACAATGGGGGTTTCTTCTAATGCTGGCATGTTATCAATGGCTCGTCAGTTATTAAATGAAAAAAACCAAGGAAGAGAGATTGGAGGTCAACAAGGTAAGGTATCTGCAACTCTTGCTCAGGCTTGGAAGGACGACATTGATGCCGGACATTTGCTATCATCTGTGCATGAACTGTTTGGCCGTAGTGTATTCACCTTTATTCCAAAAGCTGAAGCAACTATATTCTTGTGA 1623 0.4319 MSAVPKESIEVIAQSIGITNLPPDVALALAPDVEYRIREIVQESIKCMRHSKRTILTSDDVESALKLRNLEPTYGFTSNDPLRFKRAAGHKDLFYVDDKDVDFKDLIEAPLPKAPLDASVTAHWLAIEGVQPAIPENAPIEAPSETRKSDSKEDGLPVDIKLPVKHVISRELQLYFSKITELILNKPSTILFNRALISLATDSGLHPLIPYFSYFVADKVARNSNNLILLFALMRLVRSLTQNPHIHIEPYLHQLMPSVMTCLVAKRLGNRLSDDHWELRNFSANLVASICKRFGHVYHNLQPRVTKTLLHAFLDPTKSLPQHYGAIKGIAALGPNMVRMLILPNLEAYLLLLEPEMLPEKQKNALKRHEAWQVYGALLCAAGQCIHERAKVFSRMLSPASPTRAFSRGCGKVMTAMPSKRKASTDNLMQQPPLKKLATDVSGGLMPMNSLPVDMQGTPGGFSATMGVSSNAGMLSMARQLLNEKNQGREIGGQQGKVSATLAQAWKDDIDAGHLLSSVHELFGRSVFTFIPKAEATIFL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1077 540 SMART TAF_cls 2 68 IPR004823 -
Prci8g1077 540 CDD TAF6C 165 381 IPR011442 GO:0006367
Prci8g1077 540 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 2 536 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Prci8g1077 540 FunFam transcription initiation factor TFIID subunit 6 1 66 - -
Prci8g1077 540 Pfam TAF6 C-terminal HEAT repeat domain 259 346 IPR011442 GO:0006367
Prci8g1077 540 Gene3D - 164 369 IPR046344 GO:0006367
Prci8g1077 540 SUPERFAMILY ARM repeat 195 357 IPR016024 -
Prci8g1077 540 Gene3D Histone, subunit A 1 67 IPR009072 GO:0046982
Prci8g1077 540 FunFam transcription initiation factor TFIID subunit 6 164 369 - -
Prci8g1077 540 SUPERFAMILY Histone-fold 4 76 IPR009072 GO:0046982
Prci8g1077 540 Pfam TATA box binding protein associated factor (TAF) 1 66 IPR004823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1077 Prci-Chr8 7173340 7178600 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1077 K03131 - gmx:100799998 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g1077 8 7173340 7178600 Prci8g1077 8 7173340 7178600 ECH