Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1008 ATGAGTGAGGAGGGAACGGTCAAGGAAGCTTCCAATGGTAATAGCTTGCCAGAGAAAACAGTAGATGACATTAATGAAAAGAATGACTTGGAAGCTGACGGAAGAAAAGTTTTGAAAAATAATGGAATTAAAGATTTGAAAAAGGATGGTGTGAAGGAAGTAGAAGAGGATAAAAAAGATGGCAATGCAAAAGAACTAGAAGAGAGTGAGAAAGATGTTGATTTAAAAGAAGCGGAAGATAAGAGGGATGAAAATGGATCTGTGGTTGAAAAATTGGATGAAGAGGCAGAGGTTAAGGAAACTAAGGAAAGTGGAGCAGTGAAAGAAAAAGAAGCAGCTGAGAACTCCAAAATTGATGCAATGGAAGAAGAGGCTTCCCCCAACAACAACGAGGAGGCTGACAAGGAGGAACCTGAAGAAGTAGAAGAGGAGAACGATGAGGAGGAGAAAGAGAGCAAGGATATAATTGATAAGCCAAGAGAAAATGAGGAAAAAGATAGCAAAGTTAAGAAAGGATCAAAAAAGCATGCAAGGGAGAAGAGTGATGGGGAGAAAGTGAAAGAGAAAAGAAAGAAACTGTCAGAGGTGGAGCCAAGGACTCCTACTATTGATCGCCCGGTACGTGAAAGAAAATCAGTGGAGAGGTTGGTAACATCATATGAAAAAGATGCATCAAAAGAATTTCACATTGAGAAGGGCCATGGTACACCTTTGAAAGATATACCCAACGTGGCATTTAAATTATCTAGAAGGAAGCCTGATGAAACCTTCAGATTGCTCCATACCATTCTTTTTGGAAGGAGAGGGAAGGCACCGCAGATTAAGAGTAATATATTAAGGTTTTCAGGTTTTGTGTGGCGTGAAAATGAGGAAAAGCAACAAATGAAAGTAAAAGAAAAACTCGACAAGTGTAACAAAGAAAAGTTATTGGAATTCTGTGATGTGCTTGACATACAAGTTAACAAGGCAACAACCAGAAAGGAAGATATCATTACGAAGCTAATAGAATTTCTGGTGGCTCCTCATGCTACAACAACTGTCCTACTTGCAGGAAAGGAGAAGTCGAATAGGAGCAAAAAGCGCACACGGGTTGAGAAAAGAGGCTCATCAGCATCTTGGATCACAACTTCAAAACGTTCTGCCAAGAGTCGGAAGAAAAAAGAGGATTCTTCAGCTGTGGAGGAGAGGAAGAGTACTTCTGATACAGAAGATGAGTCAGAGGAAGAAGAGAAGGAAGAGAAGGAAGACGAAGAGAATGAGCAGAATGAAAATGGTGTTCCTGATAAATCTGAGGAGGAGAGGCCAGAGGGTTCTGGAAGTGAGGAGAAAAATGATTCTGGAAATGAATCTGAAGATGAAGAAAAACAGAAGAAGGCTACAAAAGCATCGTCCATAAAAAAAGAATCCTCTGCAAAAATTAAAGCCAAGAAAGTTACTTTTACGAATAAATCTCACTTAACAACAAGGAGAACACCTAAGAAATCAGCATCTACCCCGTCAAAGGTTACTGATGACAGTGATGGAAGTCCAAAGGTCTTTTCAAGGAAGAAGAAAAATGAAAAGGGGGAAAAGCAGAAGTCTTCAGTCCTCACTAAGTCATCTTCCAAAGAGAAAACTGCAGAAAAGGCAGTTAAGGGAAAGGGCAAGAACAAAGAGAAGGTGATCCCCAGTGATGAACAGTTGCGAGATGCAACATGTGAAATCCTTAAAGAAGTTGACTTCAATACAGCAACATTTACCGACATTCTGAAGCAGCTGGCAAAGCGGTTTAATGTGGATCTCACCCCAAAAAAGGCAGATATAAAGCTCATGATTCAGGAAGAGCTCACAAAACTGGCTGATGCGGCAGACGACGACGACGGAGAGGAAGATGCTGAGAAAGATGAAACCCAGCCTACTGCACCGGAGGTTAAAGCATGA 1920 0.4083 MSEEGTVKEASNGNSLPEKTVDDINEKNDLEADGRKVLKNNGIKDLKKDGVKEVEEDKKDGNAKELEESEKDVDLKEAEDKRDENGSVVEKLDEEAEVKETKESGAVKEKEAAENSKIDAMEEEASPNNNEEADKEEPEEVEEENDEEEKESKDIIDKPRENEEKDSKVKKGSKKHAREKSDGEKVKEKRKKLSEVEPRTPTIDRPVRERKSVERLVTSYEKDASKEFHIEKGHGTPLKDIPNVAFKLSRRKPDETFRLLHTILFGRRGKAPQIKSNILRFSGFVWRENEEKQQMKVKEKLDKCNKEKLLEFCDVLDIQVNKATTRKEDIITKLIEFLVAPHATTTVLLAGKEKSNRSKKRTRVEKRGSSASWITTSKRSAKSRKKKEDSSAVEERKSTSDTEDESEEEEKEEKEDEENEQNENGVPDKSEEERPEGSGSEEKNDSGNESEDEEKQKKATKASSIKKESSAKIKAKKVTFTNKSHLTTRRTPKKSASTPSKVTDDSDGSPKVFSRKKKNEKGEKQKSSVLTKSSSKEKTAEKAVKGKGKNKEKVIPSDEQLRDATCEILKEVDFNTATFTDILKQLAKRFNVDLTPKKADIKLMIQEELTKLADAADDDDGEEDAEKDETQPTAPEVKA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1008 639 Coils Coil 399 424 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 423 474 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 382 400 - -
Prci8g1008 639 Coils Coil 287 307 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 20 121 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 151 203 - -
Prci8g1008 639 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 555 610 IPR014876 -
Prci8g1008 639 FunFam DEK domain-containing chromatin associated protein 547 611 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 1 19 - -
Prci8g1008 639 Coils Coil 75 95 - -
Prci8g1008 639 PANTHER DEK PROTEIN 92 626 IPR044198 GO:0003677|GO:0006325
Prci8g1008 639 MobiDBLite consensus disorder prediction 475 507 - -
Prci8g1008 639 SUPERFAMILY DEK C-terminal domain 551 609 - -
Prci8g1008 639 Gene3D - 547 611 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 401 422 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 1 203 - -
Prci8g1008 639 Pfam DEK C terminal domain 556 609 IPR014876 -
Prci8g1008 639 MobiDBLite consensus disorder prediction 613 639 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 125 150 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 613 627 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 508 558 - -
Prci8g1008 639 MobiDBLite consensus disorder prediction 350 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1008 Prci-Chr8 6700614 6708478 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1008 K17046 - pcin:129318865 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g1008 8 6700614 6708478 Prci8g1008 8 6700614 6708478 ECH