Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0969 ATGATATGGGGGTACAGAATAAGGAAGGTATTTGCCGCCGGAGGAGGAGGAGGAGGAGGAGGATGGGTTCATGTGTGTATGATGTGGTCGGAGATGTGCTTCGGAGTGTTCTGGATTCTCACTCAATCTCTTCGTTGGACTATTCTCCATCACTCCCCCTTCAAACACATCCTCTCCCGCAGATATGGTGAAGAGGAGCTACCAGGAGTTGACATATTTGTGTGCACGGCAGATCCAAAGTTGGAGCCACCAAGCATGGTGATGAACACATTGTTATCAGCAATGTCTTACAATTATCCTGCAAATAAGCTCAGTGTTTATCTCTCTGATGATGGAGGTTCTGAGCTCACTTTCTATGCTCTTCTCAGAGCTTCTCTTTTCTCCAAGCATTGGATTCCTTTCTGCAGAAGATTCAACATTCAACCCAGATCTCCTGAGGCTTACTTTTCCCAGAATTCTGGGGCCAGCCATCAAAATCATCCAAAATTCTCATCCATCAAGAAATTATACGAAGATATGAAAAGTGAGATAGACACAGTTGTAGAAAAAGGAAAGGTTCCGGATGCAGTGAGGAGCCAACACAGAGGATTCTCAGAATGGAATGCCAAAGCCACAAAGCAGAACCATCATCCCATCGTGCAGATTATAATTGACGGAAGGGACACAAATGCTGTAGATGATGACGGATTTCCATTGCCAACCCTAGTATACGTGGCACGGGAGAAGCGACCGAATGTCCCTCACCACTTCAAAGCAGGAGCTATGAATGCACTCGTAACTAATAATTTATACGAAGCAATAAGAGTGTCATCAGAGATAAGCAATGGAGCTATAATTCTCAACTTGGACTGCGACATGTATCCAAGTAGTGCAGATACGATCCAAGAAGCACTGTGTTTCTTCATGGATGAAACAAGAGGCCACCAGATAGCTTATGTGCAATTTCCCCAAAGCTTCAACAATCTCACTAAGAATGACTTCCTCTCAAATTCTTTTGCTGTGGCCGCTCAGATTGAGCTTGCTGGCTTATGTGGACATGGAGGAACCCTATACTGTGGAACTGGGTGTTTCCATAGAAGAGAGAGTCTCTCAGGAACACATTTCAAAGATTATCGCAAAGCAAAATGGGACACCAAACCTAAGACAGAAGATAAAAGAACAGCTGATGAACTGATTGAAGCATCAAAAGCTCTTGCCAGTTGTGCATATGAGAAGGGCACACAGTGGGGCAGAGAGATGGGATTGATATATGGGATTCCTGCGGAAGACGTAGTCACAGGGCTTGTGATCTCAAGCAGAGGTTGGAAATCGATTTACTATAACCCAGAAAGAAAGGCTTTCATGGGACTAGCTCCGACAACCCTTGACGTGCTTCTTGTTCAGCACAGGAGGTGGGGACATGGCTTGTCTCAGGTCTTCTTCTCCAAGTACTGTCCTTTCATTTATGGGCACGGGAAGATCAGCTTGGGTTTTCAAATGGGATACAGTACGTACCTGCTTTGGGCTCCACTCTCTCTTCCAACTCTTTGCTATCTCATTCTCCTTCCCATTTCCACATTTCATGGCATTCCTCTGTTCCCACAGCTTACAAGCCTGTGGATCCTTCCATTCTTGTATGCATTTCTGGCAAATAATGCGTACAGCTTCTTGGAGGCTCTGAGCAGCGGCTGCACAGCCAAGGCATGGTGGAACCTGCAACGTATGACTCTGTTTCGAAAGACCACGGCGTACCTGTTTGGCTTCATGGACACCATCTCCAACAACCTCAATCTCTCCCAAATGAAGTTCGATGTCACGGACAAGGCTGTCTCCAAAGAGACCCTCGACTGCTACGAGCGAGAGGTCTTGTATTTTGGAAGCTCCTCCGTCATGTTCACCATCATGGCCACACTCGCTCTGCTCAATCTCTTTGGTGCAGTTTGGGGCTTCAAGAGGCTTCTCGAGGGATCATGGAGCCATTTGGGGTTGCAGATTGTGCTGTGCGTTTTGATTGTGGTTCTGAATAAACCTGTTTATGAGGCTCTTTTTATACGCACTGATAGAGGAAGCTTGCCATCTGAGGTCTTGTTCAAGTCTGTTGCTTTGGCTTCCTTGGGATGCTTTCTAGCTCCTTTGATATGTTGA 2124 0.4605 MIWGYRIRKVFAAGGGGGGGGWVHVCMMWSEMCFGVFWILTQSLRWTILHHSPFKHILSRRYGEEELPGVDIFVCTADPKLEPPSMVMNTLLSAMSYNYPANKLSVYLSDDGGSELTFYALLRASLFSKHWIPFCRRFNIQPRSPEAYFSQNSGASHQNHPKFSSIKKLYEDMKSEIDTVVEKGKVPDAVRSQHRGFSEWNAKATKQNHHPIVQIIIDGRDTNAVDDDGFPLPTLVYVAREKRPNVPHHFKAGAMNALVTNNLYEAIRVSSEISNGAIILNLDCDMYPSSADTIQEALCFFMDETRGHQIAYVQFPQSFNNLTKNDFLSNSFAVAAQIELAGLCGHGGTLYCGTGCFHRRESLSGTHFKDYRKAKWDTKPKTEDKRTADELIEASKALASCAYEKGTQWGREMGLIYGIPAEDVVTGLVISSRGWKSIYYNPERKAFMGLAPTTLDVLLVQHRRWGHGLSQVFFSKYCPFIYGHGKISLGFQMGYSTYLLWAPLSLPTLCYLILLPISTFHGIPLFPQLTSLWILPFLYAFLANNAYSFLEALSSGCTAKAWWNLQRMTLFRKTTAYLFGFMDTISNNLNLSQMKFDVTDKAVSKETLDCYEREVLYFGSSSVMFTIMATLALLNLFGAVWGFKRLLEGSWSHLGLQIVLCVLIVVLNKPVYEALFIRTDRGSLPSEVLFKSVALASLGCFLAPLIC 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0969 707 FunFam Cellulose synthase isolog 59 157 - -
Prci8g0969 707 Pfam Cellulose synthase 387 698 IPR005150 GO:0016020|GO:0016760|GO:0030244
Prci8g0969 707 Pfam Cellulose synthase 70 370 IPR005150 GO:0016020|GO:0016760|GO:0030244
Prci8g0969 707 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 477 IPR029044 -
Prci8g0969 707 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 201 405 IPR029044 -
Prci8g0969 707 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 59 181 IPR029044 -
Prci8g0969 707 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0969 Prci-Chr8 6426074 6431938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0969 1 700 Glycosyltransferase AT1G55850 46.685 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0969 - - pcin:129317592 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0969 8 6426074 6431938 Prci8g0969 8 6426074 6431938 ECH