Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0960 ATGGCTTTCGCAGCAGTTCTGAATGACATTTCAGATCATTCTGAAAGTGAGGATGAGGAGATGGTAGGACCCGACGAGCTGGAAGGAGAAGAACTTGGAGATGATTCTGGGTCTGCTTCTGAAGATGCCTCTGAGGACGATAATCCTCTTGCTAATGATATCTTCCAAGAAAGTGACGATGAAGCGGCAGGTACTGCAGAGTTAAGTCAAGACTCGGGTTCGGGTACGGACACTGATTCAGATTCTGATGATGATATTGAGAAAAAGTCAAGAGCTATTGATGAAGAAAGGGCGCGAGAAGAAGAAGATGCAGAAGCTGAAATGAAGCTCAATATTCAAGGAGAATCTGATGAGTTTAGATTGCCGACCAAGGAGGAACTCGAGGAAGAGGCTCTACGTCCACCTGATCTTCCAAATCTTCAGAGAAGAATCAAAGAGATTGTTCGTGTTCTTTCCAATTTTAAGGCTTTGAGAGAAGAAGGGTCAACAAGGAAGGATTACATTGACCAGCTCAAGAAAGATATATGTTCATACTATGGTTACAATGAGTTTCTTATCGGGGCTTTGGTGGAGTTGTTCCCAGTTGTTGAACTGATGGAATTGATTGAAGCCTTTGAAAAGCCACGGCCTATATGCTTAAGGACTAACACTTTGAAGACCCGCAGACGGGATTTGGCTGATGTTTTAATAAACAGAGGAGTAAACCTAGATCCTTTGAGTAAATGGTCAAAGGTTGGGCTTGTTGTGTATGATTCTCAAGTACCAATTGGTGCGACTCCGGAATATATGGCTGGTTTCTATATGCTTCAAAGTGCTAGTTCTTTTCTGCCTGTGATGGCCTTGGCTCCTCAAGAGAAGGAACGAGTTGTTGATATGGCAGCTGCACCTGGTGGTAAAACAACTTATATTGCTGCTCTTATGAAGAATACTGGAATTATTTTTGCAAATGAAATGAAGGTGCCCCGGCTTAAATCACTTACTGCAAATTTGCATCGCATGGGAGTGTCAAACACTGTAGTCTGTAACTATGATGGAAAGGAGCTCCCCAAGGTTTTGGGTCCCAATTCTGTCGATAGGGTGTTATTGGATGCCCCTTGCAGTGGTACTGGGGTTATATCTAAAGATGAGTCTGTAAAAACCTCTAAAAATCTGGAAGATATACAGAAATGTACCCATCTACAAAAGCAATTGATTCTTGCTGCCATTGACATGGTGGATGCTAATTCAAAATCTGGGGGTTATATTGTTTATTCCACATGCTCCATCATGGTGGCAGAGAATGAAGCAGTTGTTGACTATGCTCTCAAAAAGAGGGATGTTAAACTGGTGCCATGTGGTCTTGATTTTGGGCGTCCTGGGTACATAAGGTTTAGGGAGCAGCGTTTCCACCCTTCATTGGAAAAGACAAGGCGTTTCTATCCTCATGTTCACAATATGGATGGGTTTTTTGTTGCGAAGTGTAAAGTGTGGTGGCCCATTAGTCAGATTGGCTCAAAATTATATTCTTTGGACCTATATTTTGTAGTTGAAAAAATGAGCAACTCAAAGCCAAGTGCAAAACCATTAGAACCGGCTGAACAGGAGGAAGGTGCCGAGCTCGTGAAGGAAAAGGAGATTACTACTAATGGCAAAAAGCAAGATGCAGATGGCAAAAAGCAAGATGCAGATGCCAAAAGGCAAACTGCAGATGCCAAGAAACAAACTGCAAATGGCAAAATACAGACTGCAAATGCCAAGAAGCAAACTGCAAATGGCAAAATACAAACTGCAAATGGGGAACATGCGTCTGAATCCAAGAAGAGGAAGAAAAGGCAATTTCCATCTAGAGAGGAAATTTCCAAAGCCAGGGAAGAGAAGAGGAGAGCTTTAAGAGAAAAGAAAGGAAAGAAGGCAGGAAACAGAAAGTCTAAAAATGGGGATTGA 1923 0.4233 MAFAAVLNDISDHSESEDEEMVGPDELEGEELGDDSGSASEDASEDDNPLANDIFQESDDEAAGTAELSQDSGSGTDTDSDSDDDIEKKSRAIDEERAREEEDAEAEMKLNIQGESDEFRLPTKEELEEEALRPPDLPNLQRRIKEIVRVLSNFKALREEGSTRKDYIDQLKKDICSYYGYNEFLIGALVELFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTANLHRMGVSNTVVCNYDGKELPKVLGPNSVDRVLLDAPCSGTGVISKDESVKTSKNLEDIQKCTHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVVDYALKKRDVKLVPCGLDFGRPGYIRFREQRFHPSLEKTRRFYPHVHNMDGFFVAKCKVWWPISQIGSKLYSLDLYFVVEKMSNSKPSAKPLEPAEQEEGAELVKEKEITTNGKKQDADGKKQDADAKRQTADAKKQTANGKIQTANAKKQTANGKIQTANGEHASESKKRKKRQFPSREEISKAREEKRRALREKKGKKAGNRKSKNGD 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0960 640 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 164 184 IPR023273 GO:0008168
Prci8g0960 640 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 197 209 IPR023273 GO:0008168
Prci8g0960 640 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 220 233 IPR023273 GO:0008168
Prci8g0960 640 MobiDBLite consensus disorder prediction 82 106 - -
Prci8g0960 640 MobiDBLite consensus disorder prediction 1 106 - -
Prci8g0960 640 MobiDBLite consensus disorder prediction 13 54 - -
Prci8g0960 640 FunFam Ribosomal RNA methyltransferase Nop2 168 274 - -
Prci8g0960 640 Gene3D Sun protein; domain 3 167 274 - -
Prci8g0960 640 Pfam N-terminal domain of 16S rRNA methyltransferase RsmF 197 274 IPR031341 -
Prci8g0960 640 MobiDBLite consensus disorder prediction 522 565 - -
Prci8g0960 640 Gene3D Vaccinia Virus protein VP39 277 631 IPR029063 -
Prci8g0960 640 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 201 490 IPR001678 GO:0008168
Prci8g0960 640 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 173 486 IPR029063 -
Prci8g0960 640 Coils Coil 573 593 - -
Prci8g0960 640 NCBIfam NOL1/NOP2/sun family putative RNA methylase 213 487 IPR011023 GO:0003723|GO:0006396|GO:0008757
Prci8g0960 640 ProSitePatterns NOL1/NOP2/sun family signature. 357 368 IPR018314 GO:0003723|GO:0008168
Prci8g0960 640 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 79 488 IPR023267 GO:0001510
Prci8g0960 640 MobiDBLite consensus disorder prediction 566 592 - -
Prci8g0960 640 MobiDBLite consensus disorder prediction 515 640 - -
Prci8g0960 640 MobiDBLite consensus disorder prediction 593 624 - -
Prci8g0960 640 PRINTS RNA (C5-cytosine) methyltransferase signature 290 300 IPR023267 GO:0001510
Prci8g0960 640 PRINTS RNA (C5-cytosine) methyltransferase signature 358 370 IPR023267 GO:0001510
Prci8g0960 640 PRINTS RNA (C5-cytosine) methyltransferase signature 412 428 IPR023267 GO:0001510
Prci8g0960 640 PRINTS RNA (C5-cytosine) methyltransferase signature 261 275 IPR023267 GO:0001510
Prci8g0960 640 PRINTS RNA (C5-cytosine) methyltransferase signature 472 489 IPR023267 GO:0001510
Prci8g0960 640 Pfam 16S rRNA methyltransferase RsmB/F 278 487 IPR001678 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0960 Prci-Chr8 6342628 6350029 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0960 K14835 - gmx:100807160 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0960 8 6342628 6350029 Prci8g0960 8 6342628 6350029 ECH