Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g0906 ATGATCACAGAGGAGGCCATATGTCAACGACCCTTCATTGAAAGCTCTCTTCCTTCTTCCAATGTGACTCAAGAGCCTCCTCGTAGAACAGGGAAGGTGGGGAGTGCAGTGGCACATATAATAACAGCCGTCATAGGAGCCGGAGTGCTGTCTCTGGCTTGGAGCATTGCTCAGCTCGGCTGGCTCGCTGGTCCTATCTCTATCCTTCTCTTTGCTGTCACCACTCTTATTTCCTCCTTTCTCCTCTCTGACTGCTATAGATTCCCTCATTCCCATGGCTCCATCCGCAACTCCACCTACATGCACGCCGTCAAGCTCTACTTAGGTGAGCTGACTCTAACTCGGCTGTTTAAAGTGTGA 360 0.5083 MITEEAICQRPFIESSLPSSNVTQEPPRRTGKVGSAVAHIITAVIGAGVLSLAWSIAQLGWLAGPISILLFAVTTLISSFLLSDCYRFPHSHGSIRNSTYMHAVKLYLGELTLTRLFKV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g0906 119 PANTHER OS05G0424000 PROTEIN-RELATED 32 112 - -
Prci8g0906 119 Pfam Transmembrane amino acid transporter protein 30 110 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g0906 Prci-Chr8 5929756 5931664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g0906 29 110 Organic Solute Cotransporters AT5G23810 63.855 1.60e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g0906 K24917 - pcin:129318363 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g0906 8 5929756 5931664 Prci2g2337 2 18453355 18465978 CCT
Prci8g0906 8 5929756 5931664 Prci8g0906 8 5929756 5931664 ECH